Mercurial > hg > orthanc-dicomweb
view Plugin/Plugin.cpp @ 289:d7a831acaa16 refactoring
test
author | Sebastien Jodogne <s.jodogne@gmail.com> |
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date | Sat, 08 Jun 2019 11:58:49 +0200 |
parents | 29ca4d7ac067 |
children | 77d6374435dd |
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/** * Orthanc - A Lightweight, RESTful DICOM Store * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics * Department, University Hospital of Liege, Belgium * Copyright (C) 2017-2019 Osimis S.A., Belgium * * This program is free software: you can redistribute it and/or * modify it under the terms of the GNU Affero General Public License * as published by the Free Software Foundation, either version 3 of * the License, or (at your option) any later version. * * This program is distributed in the hope that it will be useful, but * WITHOUT ANY WARRANTY; without even the implied warranty of * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU * Affero General Public License for more details. * * You should have received a copy of the GNU Affero General Public License * along with this program. If not, see <http://www.gnu.org/licenses/>. **/ #include "DicomWebClient.h" #include "DicomWebServers.h" #include "GdcmParsedDicomFile.h" #include "QidoRs.h" #include "StowRs.h" #include "WadoRs.h" #include "WadoUri.h" #include <Plugins/Samples/Common/OrthancPluginCppWrapper.h> #include <Core/Toolbox.h> void SwitchStudies(OrthancPluginRestOutput* output, const char* url, const OrthancPluginHttpRequest* request) { switch (request->method) { case OrthancPluginHttpMethod_Get: // This is QIDO-RS SearchForStudies(output, url, request); break; case OrthancPluginHttpMethod_Post: // This is STOW-RS StowCallback(output, url, request); break; default: OrthancPluginSendMethodNotAllowed(OrthancPlugins::GetGlobalContext(), output, "GET,POST"); break; } } void SwitchIndividualStudy(OrthancPluginRestOutput* output, const char* url, const OrthancPluginHttpRequest* request) { switch (request->method) { case OrthancPluginHttpMethod_Get: // This is WADO-RS RetrieveDicomStudy(output, url, request); break; case OrthancPluginHttpMethod_Post: // This is STOW-RS StowCallback(output, url, request); break; default: OrthancPluginSendMethodNotAllowed(OrthancPlugins::GetGlobalContext(), output, "GET,POST"); break; } } bool RequestHasKey(const OrthancPluginHttpRequest* request, const char* key) { for (uint32_t i = 0; i < request->getCount; i++) { if (strcmp(key, request->getKeys[i]) == 0) return true; } return false; } void ListServers(OrthancPluginRestOutput* output, const char* url, const OrthancPluginHttpRequest* request) { OrthancPluginContext* context = OrthancPlugins::GetGlobalContext(); if (request->method != OrthancPluginHttpMethod_Get) { OrthancPluginSendMethodNotAllowed(context, output, "GET"); } else { std::list<std::string> servers; OrthancPlugins::DicomWebServers::GetInstance().ListServers(servers); if (RequestHasKey(request, "expand")) { Json::Value result = Json::objectValue; for (std::list<std::string>::const_iterator it = servers.begin(); it != servers.end(); ++it) { Orthanc::WebServiceParameters server = OrthancPlugins::DicomWebServers::GetInstance().GetServer(*it); Json::Value jsonServer; // only return the minimum information to identify the destination, do not include "security" information like passwords jsonServer["Url"] = server.GetUrl(); if (!server.GetUsername().empty()) { jsonServer["Username"] = server.GetUsername(); } result[*it] = jsonServer; } std::string answer = result.toStyledString(); OrthancPluginAnswerBuffer(context, output, answer.c_str(), answer.size(), "application/json"); } else // if expand is not present, keep backward compatibility and return an array of server names { Json::Value json = Json::arrayValue; for (std::list<std::string>::const_iterator it = servers.begin(); it != servers.end(); ++it) { json.append(*it); } std::string answer = json.toStyledString(); OrthancPluginAnswerBuffer(context, output, answer.c_str(), answer.size(), "application/json"); } } } void ListServerOperations(OrthancPluginRestOutput* output, const char* /*url*/, const OrthancPluginHttpRequest* request) { OrthancPluginContext* context = OrthancPlugins::GetGlobalContext(); if (request->method != OrthancPluginHttpMethod_Get) { OrthancPluginSendMethodNotAllowed(context, output, "GET"); } else { // Make sure the server does exist OrthancPlugins::DicomWebServers::GetInstance().GetServer(request->groups[0]); Json::Value json = Json::arrayValue; json.append("get"); json.append("retrieve"); json.append("stow"); std::string answer = json.toStyledString(); OrthancPluginAnswerBuffer(context, output, answer.c_str(), answer.size(), "application/json"); } } static bool DisplayPerformanceWarning(OrthancPluginContext* context) { (void) DisplayPerformanceWarning; // Disable warning about unused function OrthancPluginLogWarning(context, "Performance warning in DICOMweb: " "Non-release build, runtime debug assertions are turned on"); return true; } class StowServer : public OrthancPlugins::MultipartRestCallback { private: class Handler : public IHandler { private: unsigned int count_; unsigned int part_; public: Handler(unsigned int count) : count_(count), part_(0) { printf(" created handler: %d\n", count_); } virtual OrthancPluginErrorCode AddPart(const std::string& contentType, const std::map<std::string, std::string>& headers, const void* data, size_t size) { printf(" %d - %d - part received: [%s] %d\n", count_, part_++, contentType.c_str(), size); Json::Value v; OrthancPlugins::RestApiPost(v, "/instances", data, size, false); std::cout << v << std::endl; return OrthancPluginErrorCode_Success; } virtual OrthancPluginErrorCode Execute(OrthancPluginRestOutput* output) { printf(" %d - execute (total = %d)\n", count_, part_); //throw Orthanc::OrthancException(Orthanc::ErrorCode_CanceledJob); std::string s = "{}\n"; OrthancPluginAnswerBuffer(OrthancPlugins::GetGlobalContext(), output, s.c_str(), s.size(), "application/json"); return OrthancPluginErrorCode_Success; } }; unsigned int count_; public: StowServer() : count_(0) { } virtual IHandler* CreateHandler(OrthancPluginHttpMethod method, const std::string& url, const std::string& contentType, const std::string& subType, const std::vector<std::string>& groups, const std::map<std::string, std::string>& headers) { OrthancPluginContext* context = OrthancPlugins::GetGlobalContext(); if (method != OrthancPluginHttpMethod_Post) { return NULL; } const std::string wadoBase = OrthancPlugins::Configuration::GetBaseUrl(headers); std::string expectedStudy; if (groups.size() == 1) { expectedStudy = groups[0]; } if (expectedStudy.empty()) { OrthancPlugins::LogInfo("STOW-RS request without study"); } else { OrthancPlugins::LogInfo("STOW-RS request restricted to study UID " + expectedStudy); } if (contentType != "multipart/related") { throw Orthanc::OrthancException(Orthanc::ErrorCode_UnsupportedMediaType, "The Content-Type of a STOW-RS request must be \"multipart/related\""); } if (subType != "application/dicom") { throw Orthanc::OrthancException(Orthanc::ErrorCode_UnsupportedMediaType, "The STOW-RS plugin currently only supports \"application/dicom\" subtype"); } printf("new handler: [%s] [%s]\n", contentType.c_str(), subType.c_str()); for (std::map<std::string, std::string>::const_iterator it = headers.begin(); it != headers.end(); ++it) { printf(" header: [%s] = [%s]\n", it->first.c_str(), it->second.c_str()); } return new Handler(count_++); } }; static StowServer stowServer_; #include <boost/filesystem.hpp> #include <Core/SystemToolbox.h> class StowClientBody : public OrthancPlugins::HttpClient::IRequestBody { private: std::vector<std::string> files_; size_t position_; std::string boundary_; public: StowClientBody() : position_(0), boundary_(Orthanc::Toolbox::GenerateUuid()) { //boost::filesystem::path p("/home/jodogne/DICOM/Demo/KNIX/Knee (R)/AX. FSE PD - 5"); boost::filesystem::path p("/tmp/dicom"); boost::filesystem::directory_iterator end; // cycle through the directory for (boost::filesystem::directory_iterator it(p); it != end; ++it) { if (is_regular_file(it->path())) { files_.push_back(it->path().string()); } } } const std::string& GetBoundary() const { return boundary_; } virtual bool ReadNextChunk(std::string& chunk) { if (position_ == files_.size() + 1) { return false; } else { if (position_ == files_.size()) { chunk = ("--" + boundary_ + "--"); } else { std::string f; Orthanc::SystemToolbox::ReadFile(f, files_[position_]); chunk = ("--" + boundary_ + "\r\n" + "Content-Type: application/dicom\r\n" + "Content-Length: " + boost::lexical_cast<std::string>(f.size()) + "\r\n" + "\r\n" + f + "\r\n"); } position_++; return true; } } }; ORTHANC_PLUGINS_API OrthancPluginErrorCode OnChangeCallback(OrthancPluginChangeType changeType, OrthancPluginResourceType resourceType, const char* resourceId) { if (changeType == OrthancPluginChangeType_OrthancStarted) { try { StowClientBody stow; OrthancPlugins::HttpClient client; client.SetUrl("http://localhost:8080/dicom-web/studies"); client.SetMethod(OrthancPluginHttpMethod_Post); client.AddHeader("Accept", "application/dicom+json"); client.AddHeader("Expect", ""); client.AddHeader("Content-Type", "multipart/related; type=application/dicom; boundary=" + stow.GetBoundary()); client.SetTimeout(120); client.SetBody(stow); OrthancPlugins::HttpClient::HttpHeaders headers; std::string answer; client.Execute(headers, answer); Json::Value v; Json::Reader reader; if (reader.parse(answer, v)) { std::cout << v["00081190"].toStyledString() << std::endl; } else { throw Orthanc::OrthancException(Orthanc::ErrorCode_BadFileFormat); } } catch (Orthanc::OrthancException& e) { LOG(ERROR) << "EXCEPTION: " << e.What(); } } return OrthancPluginErrorCode_Success; } extern "C" { ORTHANC_PLUGINS_API int32_t OrthancPluginInitialize(OrthancPluginContext* context) { assert(DisplayPerformanceWarning(context)); OrthancPlugins::SetGlobalContext(context); Orthanc::Logging::Initialize(context); /* Check the version of the Orthanc core */ if (OrthancPluginCheckVersion(context) == 0) { char info[1024]; sprintf(info, "Your version of Orthanc (%s) must be above %d.%d.%d to run this plugin", context->orthancVersion, ORTHANC_PLUGINS_MINIMAL_MAJOR_NUMBER, ORTHANC_PLUGINS_MINIMAL_MINOR_NUMBER, ORTHANC_PLUGINS_MINIMAL_REVISION_NUMBER); OrthancPluginLogError(context, info); return -1; } OrthancPluginSetDescription(context, "Implementation of DICOMweb (QIDO-RS, STOW-RS and WADO-RS) and WADO-URI."); try { // Read the configuration OrthancPlugins::Configuration::Initialize(); //OrthancPluginRegisterOnChangeCallback(context, OnChangeCallback); // TODO => REMOVE stowServer_.Register("/toto"); // TODO => REMOVE // Initialize GDCM OrthancPlugins::GdcmParsedDicomFile::Initialize(); // Configure the DICOMweb callbacks if (OrthancPlugins::Configuration::GetBooleanValue("Enable", true)) { std::string root = OrthancPlugins::Configuration::GetRoot(); assert(!root.empty() && root[root.size() - 1] == '/'); OrthancPlugins::LogWarning("URI to the DICOMweb REST API: " + root); OrthancPlugins::RegisterRestCallback<SearchForInstances>(root + "instances", true); OrthancPlugins::RegisterRestCallback<SearchForSeries>(root + "series", true); OrthancPlugins::RegisterRestCallback<SwitchStudies>(root + "studies", true); OrthancPlugins::RegisterRestCallback<SwitchIndividualStudy>(root + "studies/([^/]*)", true); OrthancPlugins::RegisterRestCallback<SearchForInstances>(root + "studies/([^/]*)/instances", true); OrthancPlugins::RegisterRestCallback<RetrieveStudyMetadata>(root + "studies/([^/]*)/metadata", true); OrthancPlugins::RegisterRestCallback<SearchForSeries>(root + "studies/([^/]*)/series", true); OrthancPlugins::RegisterRestCallback<RetrieveDicomSeries>(root + "studies/([^/]*)/series/([^/]*)", true); OrthancPlugins::RegisterRestCallback<SearchForInstances>(root + "studies/([^/]*)/series/([^/]*)/instances", true); OrthancPlugins::RegisterRestCallback<RetrieveDicomInstance>(root + "studies/([^/]*)/series/([^/]*)/instances/([^/]*)", true); OrthancPlugins::RegisterRestCallback<RetrieveBulkData>(root + "studies/([^/]*)/series/([^/]*)/instances/([^/]*)/bulk/(.*)", true); OrthancPlugins::RegisterRestCallback<RetrieveInstanceMetadata>(root + "studies/([^/]*)/series/([^/]*)/instances/([^/]*)/metadata", true); OrthancPlugins::RegisterRestCallback<RetrieveSeriesMetadata>(root + "studies/([^/]*)/series/([^/]*)/metadata", true); OrthancPlugins::RegisterRestCallback<RetrieveFrames>(root + "studies/([^/]*)/series/([^/]*)/instances/([^/]*)/frames", true); OrthancPlugins::RegisterRestCallback<RetrieveFrames>(root + "studies/([^/]*)/series/([^/]*)/instances/([^/]*)/frames/([^/]*)", true); OrthancPlugins::RegisterRestCallback<ListServers>(root + "servers", true); OrthancPlugins::RegisterRestCallback<ListServerOperations>(root + "servers/([^/]*)", true); OrthancPlugins::RegisterRestCallback<StowClient>(root + "servers/([^/]*)/stow", true); OrthancPlugins::RegisterRestCallback<GetFromServer>(root + "servers/([^/]*)/get", true); OrthancPlugins::RegisterRestCallback<RetrieveFromServer>(root + "servers/([^/]*)/retrieve", true); } else { OrthancPlugins::LogWarning("DICOMweb support is disabled"); } // Configure the WADO callback if (OrthancPlugins::Configuration::GetBooleanValue("EnableWado", true)) { std::string wado = OrthancPlugins::Configuration::GetWadoRoot(); OrthancPlugins::LogWarning("URI to the WADO-URI API: " + wado); OrthancPlugins::RegisterRestCallback<WadoUriCallback>(wado, true); } else { OrthancPlugins::LogWarning("WADO-URI support is disabled"); } } catch (Orthanc::OrthancException& e) { OrthancPlugins::LogError("Exception while initializing the DICOMweb plugin: " + std::string(e.What())); return -1; } catch (...) { OrthancPlugins::LogError("Exception while initializing the DICOMweb plugin"); return -1; } return 0; } ORTHANC_PLUGINS_API void OrthancPluginFinalize() { } ORTHANC_PLUGINS_API const char* OrthancPluginGetName() { return "dicom-web"; } ORTHANC_PLUGINS_API const char* OrthancPluginGetVersion() { return ORTHANC_DICOM_WEB_VERSION; } }