Mercurial > hg > orthanc-dicomweb
view Plugin/StowRs.cpp @ 292:0222a9afa866 refactoring
reorganization
author | Sebastien Jodogne <s.jodogne@gmail.com> |
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date | Sat, 08 Jun 2019 17:47:01 +0200 |
parents | 05b4f440a961 |
children | 7e3989d2ea5a |
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/** * Orthanc - A Lightweight, RESTful DICOM Store * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics * Department, University Hospital of Liege, Belgium * Copyright (C) 2017-2019 Osimis S.A., Belgium * * This program is free software: you can redistribute it and/or * modify it under the terms of the GNU Affero General Public License * as published by the Free Software Foundation, either version 3 of * the License, or (at your option) any later version. * * This program is distributed in the hope that it will be useful, but * WITHOUT ANY WARRANTY; without even the implied warranty of * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU * Affero General Public License for more details. * * You should have received a copy of the GNU Affero General Public License * along with this program. If not, see <http://www.gnu.org/licenses/>. **/ #include "StowRs.h" #include "Configuration.h" #include "DicomWebFormatter.h" #include <Core/Toolbox.h> #include <Plugins/Samples/Common/OrthancPluginCppWrapper.h> void StowCallback(OrthancPluginRestOutput* output, const char* url, const OrthancPluginHttpRequest* request) { OrthancPluginContext* context = OrthancPlugins::GetGlobalContext(); const std::string wadoBase = OrthancPlugins::Configuration::GetBaseUrl(request); if (request->method != OrthancPluginHttpMethod_Post) { OrthancPluginSendMethodNotAllowed(context, output, "POST"); return; } std::string expectedStudy; if (request->groupsCount == 1) { expectedStudy = request->groups[0]; } if (expectedStudy.empty()) { OrthancPlugins::LogInfo("STOW-RS request without study"); } else { OrthancPlugins::LogInfo("STOW-RS request restricted to study UID " + expectedStudy); } std::string header; if (!OrthancPlugins::LookupHttpHeader(header, request, "content-type")) { OrthancPlugins::LogError("No content type in the HTTP header of a STOW-RS request"); OrthancPluginSendHttpStatusCode(context, output, 400 /* Bad request */); return; } std::string application; std::map<std::string, std::string> attributes; OrthancPlugins::ParseContentType(application, attributes, header); if (application != "multipart/related" || attributes.find("type") == attributes.end() || attributes.find("boundary") == attributes.end()) { OrthancPlugins::LogError("Unable to parse the content type of a STOW-RS request (" + application + ")"); OrthancPluginSendHttpStatusCode(context, output, 400 /* Bad request */); return; } std::string boundary = attributes["boundary"]; if (attributes["type"] != "application/dicom") { OrthancPlugins::LogError("The STOW-RS plugin currently only supports application/dicom"); OrthancPluginSendHttpStatusCode(context, output, 415 /* Unsupported media type */); return; } bool isFirst = true; Json::Value result = Json::objectValue; Json::Value success = Json::arrayValue; Json::Value failed = Json::arrayValue; std::vector<OrthancPlugins::MultipartItem> items; OrthancPlugins::ParseMultipartBody(items, request->body, request->bodySize, boundary); for (size_t i = 0; i < items.size(); i++) { OrthancPlugins::LogInfo("Detected multipart item with content type \"" + items[i].contentType_ + "\" of size " + boost::lexical_cast<std::string>(items[i].size_)); } for (size_t i = 0; i < items.size(); i++) { if (!items[i].contentType_.empty() && items[i].contentType_ != "application/dicom") { OrthancPlugins::LogError("The STOW-RS request contains a part that is not " "\"application/dicom\" (it is: \"" + items[i].contentType_ + "\")"); OrthancPluginSendHttpStatusCode(context, output, 415 /* Unsupported media type */); return; } Json::Value dicom; try { OrthancPlugins::OrthancString s; s.Assign(OrthancPluginDicomBufferToJson(context, items[i].data_, items[i].size_, OrthancPluginDicomToJsonFormat_Short, OrthancPluginDicomToJsonFlags_None, 256)); s.ToJson(dicom); } catch (Orthanc::OrthancException&) { // Bad DICOM file => TODO add to error OrthancPlugins::LogWarning("STOW-RS cannot parse an incoming DICOM file"); continue; } if (dicom.type() != Json::objectValue || !dicom.isMember(Orthanc::DICOM_TAG_SERIES_INSTANCE_UID.Format()) || !dicom.isMember(Orthanc::DICOM_TAG_SOP_CLASS_UID.Format()) || !dicom.isMember(Orthanc::DICOM_TAG_SOP_INSTANCE_UID.Format()) || !dicom.isMember(Orthanc::DICOM_TAG_STUDY_INSTANCE_UID.Format()) || dicom[Orthanc::DICOM_TAG_SERIES_INSTANCE_UID.Format()].type() != Json::stringValue || dicom[Orthanc::DICOM_TAG_SOP_CLASS_UID.Format()].type() != Json::stringValue || dicom[Orthanc::DICOM_TAG_SOP_INSTANCE_UID.Format()].type() != Json::stringValue || dicom[Orthanc::DICOM_TAG_STUDY_INSTANCE_UID.Format()].type() != Json::stringValue) { OrthancPlugins::LogWarning("STOW-RS: Missing a mandatory tag in incoming DICOM file"); continue; } const std::string seriesInstanceUid = dicom[Orthanc::DICOM_TAG_SERIES_INSTANCE_UID.Format()].asString(); const std::string sopClassUid = dicom[Orthanc::DICOM_TAG_SOP_CLASS_UID.Format()].asString(); const std::string sopInstanceUid = dicom[Orthanc::DICOM_TAG_SOP_INSTANCE_UID.Format()].asString(); const std::string studyInstanceUid = dicom[Orthanc::DICOM_TAG_STUDY_INSTANCE_UID.Format()].asString(); Json::Value item = Json::objectValue; item[OrthancPlugins::DICOM_TAG_REFERENCED_SOP_CLASS_UID.Format()] = sopClassUid; item[OrthancPlugins::DICOM_TAG_REFERENCED_SOP_INSTANCE_UID.Format()] = sopInstanceUid; if (!expectedStudy.empty() && studyInstanceUid != expectedStudy) { OrthancPlugins::LogInfo("STOW-RS request restricted to study [" + expectedStudy + "]: Ignoring instance from study [" + studyInstanceUid + "]"); /*item[OrthancPlugins::DICOM_TAG_WARNING_REASON.Format()] = boost::lexical_cast<std::string>(0xB006); // Elements discarded success.append(item);*/ } else { if (isFirst) { std::string url = wadoBase + "studies/" + studyInstanceUid; result[OrthancPlugins::DICOM_TAG_RETRIEVE_URL.Format()] = url; isFirst = false; } OrthancPlugins::MemoryBuffer tmp; bool ok = tmp.RestApiPost("/instances", items[i].data_, items[i].size_, false); tmp.Clear(); if (ok) { std::string url = (wadoBase + "studies/" + studyInstanceUid + "/series/" + seriesInstanceUid + "/instances/" + sopInstanceUid); item[OrthancPlugins::DICOM_TAG_RETRIEVE_URL.Format()] = url; success.append(item); } else { OrthancPlugins::LogError("Orthanc was unable to store instance through STOW-RS request"); item[OrthancPlugins::DICOM_TAG_FAILURE_REASON.Format()] = boost::lexical_cast<std::string>(0x0110); // Processing failure failed.append(item); } } } result[OrthancPlugins::DICOM_TAG_FAILED_SOP_SEQUENCE.Format()] = failed; result[OrthancPlugins::DICOM_TAG_REFERENCED_SOP_SEQUENCE.Format()] = success; const bool isXml = OrthancPlugins::Configuration::IsXmlExpected(request); std::string answer; { OrthancPlugins::DicomWebFormatter::Locker locker(OrthancPluginDicomWebBinaryMode_Ignore, ""); locker.Apply(answer, context, result, isXml); } OrthancPluginAnswerBuffer(context, output, answer.c_str(), answer.size(), isXml ? "application/dicom+xml" : "application/dicom+json"); } namespace OrthancPlugins { class StowServer::Handler : public IHandler { private: OrthancPluginContext* context_; bool xml_; std::string wadoBase_; std::string expectedStudy_; bool isFirst_; Json::Value result_; Json::Value success_; Json::Value failed_; public: Handler(OrthancPluginContext* context, bool xml, const std::string& wadoBase, const std::string& expectedStudy) : context_(context), xml_(xml), wadoBase_(wadoBase), expectedStudy_(expectedStudy), isFirst_(true), result_(Json::objectValue), success_(Json::arrayValue), failed_(Json::arrayValue) { } virtual OrthancPluginErrorCode AddPart(const std::string& contentType, const std::map<std::string, std::string>& headers, const void* data, size_t size) { if (contentType != "application/dicom") { throw Orthanc::OrthancException( Orthanc::ErrorCode_UnsupportedMediaType, "The STOW-RS request contains a part that is not " "\"application/dicom\" (it is: \"" + contentType + "\")"); } Json::Value dicom; try { OrthancString s; s.Assign(OrthancPluginDicomBufferToJson(context_, data, size, OrthancPluginDicomToJsonFormat_Short, OrthancPluginDicomToJsonFlags_None, 256)); s.ToJson(dicom); } catch (Orthanc::OrthancException&) { // Bad DICOM file => TODO add to error LogWarning("STOW-RS cannot parse an incoming DICOM file"); return OrthancPluginErrorCode_Success; } if (dicom.type() != Json::objectValue || !dicom.isMember(Orthanc::DICOM_TAG_SERIES_INSTANCE_UID.Format()) || !dicom.isMember(Orthanc::DICOM_TAG_SOP_CLASS_UID.Format()) || !dicom.isMember(Orthanc::DICOM_TAG_SOP_INSTANCE_UID.Format()) || !dicom.isMember(Orthanc::DICOM_TAG_STUDY_INSTANCE_UID.Format()) || dicom[Orthanc::DICOM_TAG_SERIES_INSTANCE_UID.Format()].type() != Json::stringValue || dicom[Orthanc::DICOM_TAG_SOP_CLASS_UID.Format()].type() != Json::stringValue || dicom[Orthanc::DICOM_TAG_SOP_INSTANCE_UID.Format()].type() != Json::stringValue || dicom[Orthanc::DICOM_TAG_STUDY_INSTANCE_UID.Format()].type() != Json::stringValue) { LogWarning("STOW-RS: Missing a mandatory tag in incoming DICOM file"); return OrthancPluginErrorCode_Success; } const std::string seriesInstanceUid = dicom[Orthanc::DICOM_TAG_SERIES_INSTANCE_UID.Format()].asString(); const std::string sopClassUid = dicom[Orthanc::DICOM_TAG_SOP_CLASS_UID.Format()].asString(); const std::string sopInstanceUid = dicom[Orthanc::DICOM_TAG_SOP_INSTANCE_UID.Format()].asString(); const std::string studyInstanceUid = dicom[Orthanc::DICOM_TAG_STUDY_INSTANCE_UID.Format()].asString(); Json::Value item = Json::objectValue; item[DICOM_TAG_REFERENCED_SOP_CLASS_UID.Format()] = sopClassUid; item[DICOM_TAG_REFERENCED_SOP_INSTANCE_UID.Format()] = sopInstanceUid; if (!expectedStudy_.empty() && studyInstanceUid != expectedStudy_) { LogInfo("STOW-RS request restricted to study [" + expectedStudy_ + "]: Ignoring instance from study [" + studyInstanceUid + "]"); /*item[DICOM_TAG_WARNING_REASON.Format()] = boost::lexical_cast<std::string>(0xB006); // Elements discarded success.append(item);*/ } else { if (isFirst_) { std::string url = wadoBase_ + "studies/" + studyInstanceUid; result_[DICOM_TAG_RETRIEVE_URL.Format()] = url; isFirst_ = false; } MemoryBuffer tmp; bool ok = tmp.RestApiPost("/instances", data, size, false); tmp.Clear(); if (ok) { std::string url = (wadoBase_ + "studies/" + studyInstanceUid + "/series/" + seriesInstanceUid + "/instances/" + sopInstanceUid); item[DICOM_TAG_RETRIEVE_URL.Format()] = url; success_.append(item); } else { LogError("Orthanc was unable to store one instance in a STOW-RS request"); item[DICOM_TAG_FAILURE_REASON.Format()] = boost::lexical_cast<std::string>(0x0110); // Processing failure failed_.append(item); } } return OrthancPluginErrorCode_Success; } virtual OrthancPluginErrorCode Execute(OrthancPluginRestOutput* output) { result_[DICOM_TAG_FAILED_SOP_SEQUENCE.Format()] = failed_; result_[DICOM_TAG_REFERENCED_SOP_SEQUENCE.Format()] = success_; std::string answer; { DicomWebFormatter::Locker locker(OrthancPluginDicomWebBinaryMode_Ignore, ""); locker.Apply(answer, context_, result_, xml_); } OrthancPluginAnswerBuffer(context_, output, answer.c_str(), answer.size(), xml_ ? "application/dicom+xml" : "application/dicom+json"); return OrthancPluginErrorCode_Success; } }; StowServer::IHandler* StowServer::CreateHandler(OrthancPluginHttpMethod method, const std::string& url, const std::string& contentType, const std::string& subType, const std::vector<std::string>& groups, const std::map<std::string, std::string>& headers) { OrthancPluginContext* context = GetGlobalContext(); if (method != OrthancPluginHttpMethod_Post) { return NULL; } const std::string wadoBase = Configuration::GetBaseUrl(headers); std::string expectedStudy; if (groups.size() == 1) { expectedStudy = groups[0]; } if (expectedStudy.empty()) { LogInfo("STOW-RS request without study"); } else { LogInfo("STOW-RS request restricted to study UID " + expectedStudy); } if (contentType != "multipart/related") { throw Orthanc::OrthancException(Orthanc::ErrorCode_UnsupportedMediaType, "The Content-Type of a STOW-RS request must be \"multipart/related\""); } if (subType != "application/dicom") { throw Orthanc::OrthancException(Orthanc::ErrorCode_UnsupportedMediaType, "The STOW-RS plugin currently only supports \"application/dicom\" subtype"); } return new Handler(context, Configuration::IsXmlExpected(headers), wadoBase, expectedStudy); } }