Mercurial > hg > orthanc-databases
view Framework/PostgreSQL/PostgreSQLDatabase.cpp @ 619:a9a7dceeaad0
fix pg unit tests (2) + bug in patient recycling+protection
author | Alain Mazy <am@orthanc.team> |
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date | Wed, 18 Dec 2024 12:22:00 +0100 |
parents | 5abad3976d9f |
children |
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/** * Orthanc - A Lightweight, RESTful DICOM Store * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics * Department, University Hospital of Liege, Belgium * Copyright (C) 2017-2023 Osimis S.A., Belgium * Copyright (C) 2024-2024 Orthanc Team SRL, Belgium * Copyright (C) 2021-2024 Sebastien Jodogne, ICTEAM UCLouvain, Belgium * * This program is free software: you can redistribute it and/or * modify it under the terms of the GNU Affero General Public License * as published by the Free Software Foundation, either version 3 of * the License, or (at your option) any later version. * * This program is distributed in the hope that it will be useful, but * WITHOUT ANY WARRANTY; without even the implied warranty of * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU * Affero General Public License for more details. * * You should have received a copy of the GNU Affero General Public License * along with this program. If not, see <http://www.gnu.org/licenses/>. **/ #include "PostgreSQLIncludes.h" // Must be the first #include "PostgreSQLDatabase.h" #include "../Common/ImplicitTransaction.h" #include "../Common/RetryDatabaseFactory.h" #include "PostgreSQLResult.h" #include "PostgreSQLStatement.h" #include "PostgreSQLTransaction.h" #include <Logging.h> #include <OrthancException.h> #include <Toolbox.h> #include <boost/lexical_cast.hpp> #include <boost/thread.hpp> namespace OrthancDatabases { void PostgreSQLDatabase::ThrowException(bool log) { if (log) { LOG(ERROR) << "PostgreSQL error: " << PQerrorMessage(reinterpret_cast<PGconn*>(pg_)); } if (PQstatus(reinterpret_cast<PGconn*>(pg_)) == CONNECTION_OK) { throw Orthanc::OrthancException(Orthanc::ErrorCode_Database); } else { throw Orthanc::OrthancException(Orthanc::ErrorCode_DatabaseUnavailable); } } void PostgreSQLDatabase::Close() { if (pg_ != NULL) { LOG(INFO) << "Closing connection to PostgreSQL"; PQfinish(reinterpret_cast<PGconn*>(pg_)); pg_ = NULL; } } PostgreSQLDatabase::~PostgreSQLDatabase() { try { Close(); } catch (Orthanc::OrthancException&) { // Ignore possible exceptions due to connection loss } } void PostgreSQLDatabase::Open() { if (pg_ != NULL) { // Already connected return; } std::string s; parameters_.Format(s); pg_ = PQconnectdb(s.c_str()); if (pg_ == NULL || PQstatus(reinterpret_cast<PGconn*>(pg_)) != CONNECTION_OK) { std::string message; if (pg_) { message = PQerrorMessage(reinterpret_cast<PGconn*>(pg_)); PQfinish(reinterpret_cast<PGconn*>(pg_)); pg_ = NULL; } LOG(ERROR) << "PostgreSQL error: " << message; throw Orthanc::OrthancException(Orthanc::ErrorCode_DatabaseUnavailable); } } bool PostgreSQLDatabase::RunAdvisoryLockStatement(const std::string& statement) { PostgreSQLTransaction transaction(*this, TransactionType_ReadWrite); Query query(statement, false); PostgreSQLStatement s(*this, query); PostgreSQLResult result(s); bool success = (!result.IsDone() && result.GetBoolean(0)); transaction.Commit(); return success; } bool PostgreSQLDatabase::AcquireAdvisoryLock(int32_t lock) { return RunAdvisoryLockStatement( "select pg_try_advisory_lock(" + boost::lexical_cast<std::string>(lock) + ")"); } bool PostgreSQLDatabase::ReleaseAdvisoryLock(int32_t lock) { return RunAdvisoryLockStatement( "select pg_advisory_unlock(" + boost::lexical_cast<std::string>(lock) + ")"); } void PostgreSQLDatabase::AdvisoryLock(int32_t lock) { if (!AcquireAdvisoryLock(lock)) { LOG(ERROR) << "The PostgreSQL database is locked by another instance of Orthanc"; throw Orthanc::OrthancException(Orthanc::ErrorCode_Database); } } void PostgreSQLDatabase::ExecuteMultiLines(const std::string& sql) { if (IsVerboseEnabled()) { LOG(INFO) << "PostgreSQL: " << sql; } Open(); PGresult* result = PQexec(reinterpret_cast<PGconn*>(pg_), sql.c_str()); if (result == NULL) { ThrowException(true); } bool ok = (PQresultStatus(result) == PGRES_COMMAND_OK || PQresultStatus(result) == PGRES_TUPLES_OK); if (ok) { PQclear(result); } else { std::string message = PQresultErrorMessage(result); PQclear(result); LOG(ERROR) << "PostgreSQL error: " << message; ThrowException(false); } } bool PostgreSQLDatabase::DoesTableExist(const std::string& name) { std::string lower; Orthanc::Toolbox::ToLowerCase(lower, name); // http://stackoverflow.com/a/24089729/881731 PostgreSQLStatement statement(*this, "SELECT 1 FROM pg_catalog.pg_class c " "JOIN pg_catalog.pg_namespace n ON n.oid = c.relnamespace " "WHERE n.nspname = 'public' AND c.relkind='r' " "AND c.relname=$1"); statement.DeclareInputString(0); statement.BindString(0, lower); PostgreSQLResult result(statement); return !result.IsDone(); } bool PostgreSQLDatabase::DoesIndexExist(const std::string& name) { std::string lower; Orthanc::Toolbox::ToLowerCase(lower, name); // http://stackoverflow.com/a/24089729/881731 PostgreSQLStatement statement(*this, "SELECT 1 FROM pg_catalog.pg_class c " "JOIN pg_catalog.pg_namespace n ON n.oid = c.relnamespace " "WHERE n.nspname = 'public' AND c.relkind='i' " "AND c.relname=$1"); statement.DeclareInputString(0); statement.BindString(0, lower); PostgreSQLResult result(statement); return !result.IsDone(); } bool PostgreSQLDatabase::DoesColumnExist(const std::string& tableName, const std::string& columnName) { std::string lowerTable, lowerColumn; Orthanc::Toolbox::ToLowerCase(lowerTable, tableName); Orthanc::Toolbox::ToLowerCase(lowerColumn, columnName); PostgreSQLStatement statement(*this, "SELECT 1 FROM information_schema.columns " "WHERE table_schema=$1 AND table_name=$2 AND column_name=$3"); statement.DeclareInputString(0); statement.DeclareInputString(1); statement.DeclareInputString(2); statement.BindString(0, "public" /* schema */); statement.BindString(1, lowerTable); statement.BindString(2, lowerColumn); PostgreSQLResult result(statement); return !result.IsDone(); } void PostgreSQLDatabase::ClearAll() { PostgreSQLTransaction transaction(*this, TransactionType_ReadWrite); // Remove all the large objects ExecuteMultiLines("SELECT lo_unlink(loid) FROM (SELECT DISTINCT loid FROM pg_catalog.pg_largeobject) as loids;"); // http://stackoverflow.com/a/21247009/881731 ExecuteMultiLines("DROP SCHEMA public CASCADE;"); ExecuteMultiLines("CREATE SCHEMA public;"); ExecuteMultiLines("GRANT ALL ON SCHEMA public TO postgres;"); ExecuteMultiLines("GRANT ALL ON SCHEMA public TO public;"); ExecuteMultiLines("COMMENT ON SCHEMA public IS 'standard public schema';"); transaction.Commit(); } IPrecompiledStatement* PostgreSQLDatabase::Compile(const Query& query) { return new PostgreSQLStatement(*this, query); } namespace { class PostgreSQLImplicitTransaction : public ImplicitTransaction { private: PostgreSQLDatabase& db_; protected: virtual IResult* ExecuteInternal(IPrecompiledStatement& statement, const Dictionary& parameters) ORTHANC_OVERRIDE { return dynamic_cast<PostgreSQLStatement&>(statement).Execute(*this, parameters); } virtual void ExecuteWithoutResultInternal(IPrecompiledStatement& statement, const Dictionary& parameters) ORTHANC_OVERRIDE { dynamic_cast<PostgreSQLStatement&>(statement).ExecuteWithoutResult(*this, parameters); } public: explicit PostgreSQLImplicitTransaction(PostgreSQLDatabase& db) : db_(db) { } virtual bool DoesTableExist(const std::string& name) ORTHANC_OVERRIDE { return db_.DoesTableExist(name.c_str()); } virtual bool DoesIndexExist(const std::string& name) ORTHANC_OVERRIDE { return db_.DoesIndexExist(name.c_str()); } virtual bool DoesTriggerExist(const std::string& name) ORTHANC_OVERRIDE { return false; } virtual void ExecuteMultiLines(const std::string& query) ORTHANC_OVERRIDE { db_.ExecuteMultiLines(query); } }; } ITransaction* PostgreSQLDatabase::CreateTransaction(TransactionType type) { switch (type) { case TransactionType_Implicit: return new PostgreSQLImplicitTransaction(*this); case TransactionType_ReadWrite: case TransactionType_ReadOnly: return new PostgreSQLTransaction(*this, type); default: throw Orthanc::OrthancException(Orthanc::ErrorCode_ParameterOutOfRange); } } PostgreSQLDatabase::TransientAdvisoryLock::TransientAdvisoryLock( PostgreSQLDatabase& database, int32_t lock, unsigned int retries, unsigned int retryInterval) : database_(database), lock_(lock) { bool locked = true; for (unsigned int i = 0; i < retries; i++) { if (database_.AcquireAdvisoryLock(lock_)) { locked = false; break; } else { boost::this_thread::sleep(boost::posix_time::milliseconds(retryInterval)); } } if (locked) { LOG(ERROR) << "Cannot acquire a transient advisory lock"; throw Orthanc::OrthancException(Orthanc::ErrorCode_Plugin); } } PostgreSQLDatabase::TransientAdvisoryLock::~TransientAdvisoryLock() { database_.ReleaseAdvisoryLock(lock_); } class PostgreSQLDatabase::Factory : public RetryDatabaseFactory { private: PostgreSQLParameters parameters_; protected: virtual IDatabase* TryOpen() { std::unique_ptr<PostgreSQLDatabase> db(new PostgreSQLDatabase(parameters_)); db->Open(); return db.release(); } public: explicit Factory(const PostgreSQLParameters& parameters) : RetryDatabaseFactory(parameters.GetMaxConnectionRetries(), parameters.GetConnectionRetryInterval()), parameters_(parameters) { } }; IDatabaseFactory* PostgreSQLDatabase::CreateDatabaseFactory(const PostgreSQLParameters& parameters) { return new Factory(parameters); } PostgreSQLDatabase* PostgreSQLDatabase::CreateDatabaseConnection(const PostgreSQLParameters& parameters) { Factory factory(parameters); return dynamic_cast<PostgreSQLDatabase*>(factory.Open()); } }