Mercurial > hg > orthanc-databases
view Framework/Plugins/IndexUnitTests.h @ 273:07881ac5404b
fix build against system-wide orthanc framework
author | Sebastien Jodogne <s.jodogne@gmail.com> |
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date | Thu, 22 Apr 2021 14:53:52 +0200 |
parents | cc7af42d4f23 |
children | 6d4d413a8797 |
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/** * Orthanc - A Lightweight, RESTful DICOM Store * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics * Department, University Hospital of Liege, Belgium * Copyright (C) 2017-2021 Osimis S.A., Belgium * * This program is free software: you can redistribute it and/or * modify it under the terms of the GNU Affero General Public License * as published by the Free Software Foundation, either version 3 of * the License, or (at your option) any later version. * * This program is distributed in the hope that it will be useful, but * WITHOUT ANY WARRANTY; without even the implied warranty of * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU * Affero General Public License for more details. * * You should have received a copy of the GNU Affero General Public License * along with this program. If not, see <http://www.gnu.org/licenses/>. **/ #pragma once #include "../Common/ImplicitTransaction.h" #include "DatabaseBackendAdapterV2.h" #include "GlobalProperties.h" #include <Compatibility.h> // For std::unique_ptr<> #include <orthanc/OrthancCDatabasePlugin.h> #include <gtest/gtest.h> #include <list> #if !defined(ORTHANC_DATABASE_VERSION) // This happens if using the Orthanc framework system-wide library # define ORTHANC_DATABASE_VERSION 6 #endif #if ORTHANC_ENABLE_POSTGRESQL == 1 # define HAS_REVISIONS 1 #elif ORTHANC_ENABLE_MYSQL == 1 # define HAS_REVISIONS 0 #elif ORTHANC_ENABLE_SQLITE == 1 # define HAS_REVISIONS 1 #else # error Unknown database backend #endif namespace Orthanc { /** * Mock enumeration inspired from the source code of Orthanc... only * for use in the unit tests! * https://hg.orthanc-server.com/orthanc/file/default/OrthancServer/Sources/ServerEnumerations.h **/ enum MetadataType { MetadataType_ModifiedFrom, MetadataType_LastUpdate }; } static std::unique_ptr<OrthancPluginAttachment> expectedAttachment; static std::list<OrthancPluginDicomTag> expectedDicomTags; static std::unique_ptr<OrthancPluginExportedResource> expectedExported; static void CheckAttachment(const OrthancPluginAttachment& attachment) { ASSERT_STREQ(expectedAttachment->uuid, attachment.uuid); ASSERT_EQ(expectedAttachment->contentType, attachment.contentType); ASSERT_EQ(expectedAttachment->uncompressedSize, attachment.uncompressedSize); ASSERT_STREQ(expectedAttachment->uncompressedHash, attachment.uncompressedHash); ASSERT_EQ(expectedAttachment->compressionType, attachment.compressionType); ASSERT_EQ(expectedAttachment->compressedSize, attachment.compressedSize); ASSERT_STREQ(expectedAttachment->compressedHash, attachment.compressedHash); } static void CheckExportedResource(const OrthancPluginExportedResource& exported) { ASSERT_EQ(expectedExported->seq, exported.seq); ASSERT_EQ(expectedExported->resourceType, exported.resourceType); ASSERT_STREQ(expectedExported->publicId, exported.publicId); ASSERT_STREQ(expectedExported->modality, exported.modality); ASSERT_STREQ(expectedExported->date, exported.date); ASSERT_STREQ(expectedExported->patientId, exported.patientId); ASSERT_STREQ(expectedExported->studyInstanceUid, exported.studyInstanceUid); ASSERT_STREQ(expectedExported->seriesInstanceUid, exported.seriesInstanceUid); ASSERT_STREQ(expectedExported->sopInstanceUid, exported.sopInstanceUid); } static void CheckDicomTag(const OrthancPluginDicomTag& tag) { for (std::list<OrthancPluginDicomTag>::const_iterator it = expectedDicomTags.begin(); it != expectedDicomTags.end(); ++it) { if (it->group == tag.group && it->element == tag.element && !strcmp(it->value, tag.value)) { // OK, match return; } } ASSERT_TRUE(0); // Error } static OrthancPluginErrorCode InvokeService(struct _OrthancPluginContext_t* context, _OrthancPluginService service, const void* params) { switch (service) { case _OrthancPluginService_DatabaseAnswer: { const _OrthancPluginDatabaseAnswer& answer = *reinterpret_cast<const _OrthancPluginDatabaseAnswer*>(params); switch (answer.type) { case _OrthancPluginDatabaseAnswerType_Attachment: { const OrthancPluginAttachment& attachment = *reinterpret_cast<const OrthancPluginAttachment*>(answer.valueGeneric); CheckAttachment(attachment); break; } case _OrthancPluginDatabaseAnswerType_ExportedResource: { const OrthancPluginExportedResource& attachment = *reinterpret_cast<const OrthancPluginExportedResource*>(answer.valueGeneric); CheckExportedResource(attachment); break; } case _OrthancPluginDatabaseAnswerType_DicomTag: { const OrthancPluginDicomTag& tag = *reinterpret_cast<const OrthancPluginDicomTag*>(answer.valueGeneric); CheckDicomTag(tag); break; } default: printf("Unhandled message: %d\n", answer.type); break; } return OrthancPluginErrorCode_Success; } case _OrthancPluginService_GetExpectedDatabaseVersion: { const _OrthancPluginReturnSingleValue& p = *reinterpret_cast<const _OrthancPluginReturnSingleValue*>(params); *(p.resultUint32) = ORTHANC_DATABASE_VERSION; return OrthancPluginErrorCode_Success; } default: assert(0); printf("Service not emulated: %d\n", service); return OrthancPluginErrorCode_NotImplemented; } } TEST(IndexBackend, Basic) { using namespace OrthancDatabases; OrthancPluginContext context; context.pluginsManager = NULL; context.orthancVersion = "mainline"; context.Free = ::free; context.InvokeService = InvokeService; ImplicitTransaction::SetErrorOnDoubleExecution(true); #if ORTHANC_ENABLE_POSTGRESQL == 1 PostgreSQLIndex db(&context, globalParameters_); db.SetClearAll(true); #elif ORTHANC_ENABLE_MYSQL == 1 MySQLIndex db(&context, globalParameters_); db.SetClearAll(true); #elif ORTHANC_ENABLE_SQLITE == 1 SQLiteIndex db(&context); // Open in memory #else # error Unsupported database backend #endif db.SetOutputFactory(new DatabaseBackendAdapterV2::Factory(&context, NULL)); std::unique_ptr<DatabaseManager> manager(IndexBackend::CreateSingleDatabaseManager(db)); std::unique_ptr<IDatabaseBackendOutput> output(db.CreateOutput()); std::string s; ASSERT_TRUE(db.LookupGlobalProperty(s, *manager, MISSING_SERVER_IDENTIFIER, Orthanc::GlobalProperty_DatabaseSchemaVersion)); ASSERT_EQ("6", s); ASSERT_FALSE(db.LookupGlobalProperty(s, *manager, MISSING_SERVER_IDENTIFIER, Orthanc::GlobalProperty_DatabaseInternal9)); db.SetGlobalProperty(*manager, MISSING_SERVER_IDENTIFIER, Orthanc::GlobalProperty_DatabaseInternal9, "Hello"); ASSERT_TRUE(db.LookupGlobalProperty(s, *manager, MISSING_SERVER_IDENTIFIER, Orthanc::GlobalProperty_DatabaseInternal9)); ASSERT_EQ("Hello", s); db.SetGlobalProperty(*manager, MISSING_SERVER_IDENTIFIER, Orthanc::GlobalProperty_DatabaseInternal9, "HelloWorld"); ASSERT_TRUE(db.LookupGlobalProperty(s, *manager, MISSING_SERVER_IDENTIFIER, Orthanc::GlobalProperty_DatabaseInternal9)); ASSERT_EQ("HelloWorld", s); int64_t a = db.CreateResource(*manager, "study", OrthancPluginResourceType_Study); ASSERT_TRUE(db.IsExistingResource(*manager, a)); ASSERT_FALSE(db.IsExistingResource(*manager, a + 1)); int64_t b; OrthancPluginResourceType t; ASSERT_FALSE(db.LookupResource(b, t, *manager, "world")); ASSERT_TRUE(db.LookupResource(b, t, *manager, "study")); ASSERT_EQ(a, b); ASSERT_EQ(OrthancPluginResourceType_Study, t); b = db.CreateResource(*manager, "series", OrthancPluginResourceType_Series); ASSERT_NE(a, b); ASSERT_EQ("study", db.GetPublicId(*manager, a)); ASSERT_EQ("series", db.GetPublicId(*manager, b)); ASSERT_EQ(OrthancPluginResourceType_Study, db.GetResourceType(*manager, a)); ASSERT_EQ(OrthancPluginResourceType_Series, db.GetResourceType(*manager, b)); db.AttachChild(*manager, a, b); int64_t c; ASSERT_FALSE(db.LookupParent(c, *manager, a)); ASSERT_TRUE(db.LookupParent(c, *manager, b)); ASSERT_EQ(a, c); c = db.CreateResource(*manager, "series2", OrthancPluginResourceType_Series); db.AttachChild(*manager, a, c); ASSERT_EQ(3u, db.GetAllResourcesCount(*manager)); ASSERT_EQ(0u, db.GetResourcesCount(*manager, OrthancPluginResourceType_Patient)); ASSERT_EQ(1u, db.GetResourcesCount(*manager, OrthancPluginResourceType_Study)); ASSERT_EQ(2u, db.GetResourcesCount(*manager, OrthancPluginResourceType_Series)); ASSERT_FALSE(db.GetParentPublicId(s, *manager, a)); ASSERT_TRUE(db.GetParentPublicId(s, *manager, b)); ASSERT_EQ("study", s); ASSERT_TRUE(db.GetParentPublicId(s, *manager, c)); ASSERT_EQ("study", s); std::list<std::string> children; db.GetChildren(children, *manager, a); ASSERT_EQ(2u, children.size()); db.GetChildren(children, *manager, b); ASSERT_EQ(0u, children.size()); db.GetChildren(children, *manager, c); ASSERT_EQ(0u, children.size()); std::list<std::string> cp; db.GetChildrenPublicId(cp, *manager, a); ASSERT_EQ(2u, cp.size()); ASSERT_TRUE(cp.front() == "series" || cp.front() == "series2"); ASSERT_TRUE(cp.back() == "series" || cp.back() == "series2"); ASSERT_NE(cp.front(), cp.back()); std::list<std::string> pub; db.GetAllPublicIds(pub, *manager, OrthancPluginResourceType_Patient); ASSERT_EQ(0u, pub.size()); db.GetAllPublicIds(pub, *manager, OrthancPluginResourceType_Study); ASSERT_EQ(1u, pub.size()); ASSERT_EQ("study", pub.front()); db.GetAllPublicIds(pub, *manager, OrthancPluginResourceType_Series); ASSERT_EQ(2u, pub.size()); ASSERT_TRUE(pub.front() == "series" || pub.front() == "series2"); ASSERT_TRUE(pub.back() == "series" || pub.back() == "series2"); ASSERT_NE(pub.front(), pub.back()); std::list<int64_t> ci; db.GetChildrenInternalId(ci, *manager, a); ASSERT_EQ(2u, ci.size()); ASSERT_TRUE(ci.front() == b || ci.front() == c); ASSERT_TRUE(ci.back() == b || ci.back() == c); ASSERT_NE(ci.front(), ci.back()); db.SetMetadata(*manager, a, Orthanc::MetadataType_ModifiedFrom, "modified", 42); db.SetMetadata(*manager, a, Orthanc::MetadataType_LastUpdate, "update2", 43); int64_t revision = -1; ASSERT_FALSE(db.LookupMetadata(s, revision, *manager, b, Orthanc::MetadataType_LastUpdate)); ASSERT_TRUE(db.LookupMetadata(s, revision, *manager, a, Orthanc::MetadataType_LastUpdate)); ASSERT_EQ("update2", s); #if HAS_REVISIONS == 1 ASSERT_EQ(43, revision); #else ASSERT_EQ(0, revision); #endif db.SetMetadata(*manager, a, Orthanc::MetadataType_LastUpdate, "update", 44); ASSERT_TRUE(db.LookupMetadata(s, revision, *manager, a, Orthanc::MetadataType_LastUpdate)); ASSERT_EQ("update", s); #if HAS_REVISIONS == 1 ASSERT_EQ(44, revision); #else ASSERT_EQ(0, revision); #endif std::list<int32_t> md; db.ListAvailableMetadata(md, *manager, a); ASSERT_EQ(2u, md.size()); ASSERT_TRUE(md.front() == Orthanc::MetadataType_ModifiedFrom || md.back() == Orthanc::MetadataType_ModifiedFrom); ASSERT_TRUE(md.front() == Orthanc::MetadataType_LastUpdate || md.back() == Orthanc::MetadataType_LastUpdate); std::string mdd; ASSERT_TRUE(db.LookupMetadata(mdd, revision, *manager, a, Orthanc::MetadataType_ModifiedFrom)); ASSERT_EQ("modified", mdd); #if HAS_REVISIONS == 1 ASSERT_EQ(42, revision); #else ASSERT_EQ(0, revision); #endif ASSERT_TRUE(db.LookupMetadata(mdd, revision, *manager, a, Orthanc::MetadataType_LastUpdate)); ASSERT_EQ("update", mdd); #if HAS_REVISIONS == 1 ASSERT_EQ(44, revision); #else ASSERT_EQ(0, revision); #endif db.ListAvailableMetadata(md, *manager, b); ASSERT_EQ(0u, md.size()); ASSERT_TRUE(db.LookupMetadata(s, revision, *manager, a, Orthanc::MetadataType_LastUpdate)); db.DeleteMetadata(*manager, a, Orthanc::MetadataType_LastUpdate); ASSERT_FALSE(db.LookupMetadata(s, revision, *manager, a, Orthanc::MetadataType_LastUpdate)); db.DeleteMetadata(*manager, b, Orthanc::MetadataType_LastUpdate); ASSERT_FALSE(db.LookupMetadata(s, revision, *manager, a, Orthanc::MetadataType_LastUpdate)); db.ListAvailableMetadata(md, *manager, a); ASSERT_EQ(1u, md.size()); ASSERT_EQ(Orthanc::MetadataType_ModifiedFrom, md.front()); ASSERT_EQ(0u, db.GetTotalCompressedSize(*manager)); ASSERT_EQ(0u, db.GetTotalUncompressedSize(*manager)); std::list<int32_t> fc; OrthancPluginAttachment a1; a1.uuid = "uuid1"; a1.contentType = Orthanc::FileContentType_Dicom; a1.uncompressedSize = 42; a1.uncompressedHash = "md5_1"; a1.compressionType = Orthanc::CompressionType_None; a1.compressedSize = 42; a1.compressedHash = "md5_1"; OrthancPluginAttachment a2; a2.uuid = "uuid2"; a2.contentType = Orthanc::FileContentType_DicomAsJson; a2.uncompressedSize = 4242; a2.uncompressedHash = "md5_2"; a2.compressionType = Orthanc::CompressionType_None; a2.compressedSize = 4242; a2.compressedHash = "md5_2"; db.AddAttachment(*manager, a, a1, 42); db.ListAvailableAttachments(fc, *manager, a); ASSERT_EQ(1u, fc.size()); ASSERT_EQ(Orthanc::FileContentType_Dicom, fc.front()); db.AddAttachment(*manager, a, a2, 43); db.ListAvailableAttachments(fc, *manager, a); ASSERT_EQ(2u, fc.size()); ASSERT_FALSE(db.LookupAttachment(*output, revision, *manager, b, Orthanc::FileContentType_Dicom)); ASSERT_EQ(4284u, db.GetTotalCompressedSize(*manager)); ASSERT_EQ(4284u, db.GetTotalUncompressedSize(*manager)); expectedAttachment.reset(new OrthancPluginAttachment); expectedAttachment->uuid = "uuid1"; expectedAttachment->contentType = Orthanc::FileContentType_Dicom; expectedAttachment->uncompressedSize = 42; expectedAttachment->uncompressedHash = "md5_1"; expectedAttachment->compressionType = Orthanc::CompressionType_None; expectedAttachment->compressedSize = 42; expectedAttachment->compressedHash = "md5_1"; ASSERT_TRUE(db.LookupAttachment(*output, revision, *manager, a, Orthanc::FileContentType_Dicom)); #if HAS_REVISIONS == 1 ASSERT_EQ(42, revision); #else ASSERT_EQ(0, revision); #endif expectedAttachment.reset(new OrthancPluginAttachment); expectedAttachment->uuid = "uuid2"; expectedAttachment->contentType = Orthanc::FileContentType_DicomAsJson; expectedAttachment->uncompressedSize = 4242; expectedAttachment->uncompressedHash = "md5_2"; expectedAttachment->compressionType = Orthanc::CompressionType_None; expectedAttachment->compressedSize = 4242; expectedAttachment->compressedHash = "md5_2"; revision = -1; ASSERT_TRUE(db.LookupAttachment(*output, revision, *manager, a, Orthanc::FileContentType_DicomAsJson)); #if HAS_REVISIONS == 1 ASSERT_EQ(43, revision); #else ASSERT_EQ(0, revision); #endif db.ListAvailableAttachments(fc, *manager, b); ASSERT_EQ(0u, fc.size()); db.DeleteAttachment(*output, *manager, a, Orthanc::FileContentType_Dicom); db.ListAvailableAttachments(fc, *manager, a); ASSERT_EQ(1u, fc.size()); ASSERT_EQ(Orthanc::FileContentType_DicomAsJson, fc.front()); db.DeleteAttachment(*output, *manager, a, Orthanc::FileContentType_DicomAsJson); db.ListAvailableAttachments(fc, *manager, a); ASSERT_EQ(0u, fc.size()); db.SetIdentifierTag(*manager, a, 0x0010, 0x0020, "patient"); db.SetIdentifierTag(*manager, a, 0x0020, 0x000d, "study"); expectedDicomTags.clear(); expectedDicomTags.push_back(OrthancPluginDicomTag()); expectedDicomTags.push_back(OrthancPluginDicomTag()); expectedDicomTags.front().group = 0x0010; expectedDicomTags.front().element = 0x0020; expectedDicomTags.front().value = "patient"; expectedDicomTags.back().group = 0x0020; expectedDicomTags.back().element = 0x000d; expectedDicomTags.back().value = "study"; db.GetMainDicomTags(*output, *manager, a); db.LookupIdentifier(ci, *manager, OrthancPluginResourceType_Study, 0x0010, 0x0020, OrthancPluginIdentifierConstraint_Equal, "patient"); ASSERT_EQ(1u, ci.size()); ASSERT_EQ(a, ci.front()); db.LookupIdentifier(ci, *manager, OrthancPluginResourceType_Study, 0x0010, 0x0020, OrthancPluginIdentifierConstraint_Equal, "study"); ASSERT_EQ(0u, ci.size()); OrthancPluginExportedResource exp; exp.seq = -1; exp.resourceType = OrthancPluginResourceType_Study; exp.publicId = "id"; exp.modality = "remote"; exp.date = "date"; exp.patientId = "patient"; exp.studyInstanceUid = "study"; exp.seriesInstanceUid = "series"; exp.sopInstanceUid = "instance"; db.LogExportedResource(*manager, exp); expectedExported.reset(new OrthancPluginExportedResource()); *expectedExported = exp; expectedExported->seq = 1; bool done; db.GetExportedResources(*output, done, *manager, 0, 10); db.GetAllPublicIds(pub, *manager, OrthancPluginResourceType_Patient); ASSERT_EQ(0u, pub.size()); db.GetAllPublicIds(pub, *manager, OrthancPluginResourceType_Study); ASSERT_EQ(1u, pub.size()); db.GetAllPublicIds(pub, *manager, OrthancPluginResourceType_Series); ASSERT_EQ(2u, pub.size()); db.GetAllPublicIds(pub, *manager, OrthancPluginResourceType_Instance); ASSERT_EQ(0u, pub.size()); ASSERT_EQ(3u, db.GetAllResourcesCount(*manager)); ASSERT_EQ(0u, db.GetUnprotectedPatientsCount(*manager)); // No patient was inserted ASSERT_TRUE(db.IsExistingResource(*manager, c)); { // A transaction is needed here for MySQL, as it was not possible // to implement recursive deletion of resources using pure SQL // statements manager->StartTransaction(TransactionType_ReadWrite); db.DeleteResource(*output, *manager, c); manager->CommitTransaction(); } ASSERT_FALSE(db.IsExistingResource(*manager, c)); ASSERT_TRUE(db.IsExistingResource(*manager, a)); ASSERT_TRUE(db.IsExistingResource(*manager, b)); ASSERT_EQ(2u, db.GetAllResourcesCount(*manager)); db.DeleteResource(*output, *manager, a); ASSERT_EQ(0u, db.GetAllResourcesCount(*manager)); ASSERT_FALSE(db.IsExistingResource(*manager, a)); ASSERT_FALSE(db.IsExistingResource(*manager, b)); ASSERT_FALSE(db.IsExistingResource(*manager, c)); ASSERT_EQ(0u, db.GetAllResourcesCount(*manager)); ASSERT_EQ(0u, db.GetUnprotectedPatientsCount(*manager)); int64_t p1 = db.CreateResource(*manager, "patient1", OrthancPluginResourceType_Patient); int64_t p2 = db.CreateResource(*manager, "patient2", OrthancPluginResourceType_Patient); int64_t p3 = db.CreateResource(*manager, "patient3", OrthancPluginResourceType_Patient); ASSERT_EQ(3u, db.GetUnprotectedPatientsCount(*manager)); int64_t r; ASSERT_TRUE(db.SelectPatientToRecycle(r, *manager)); ASSERT_EQ(p1, r); ASSERT_TRUE(db.SelectPatientToRecycle(r, *manager, p1)); ASSERT_EQ(p2, r); ASSERT_FALSE(db.IsProtectedPatient(*manager, p1)); db.SetProtectedPatient(*manager, p1, true); ASSERT_TRUE(db.IsProtectedPatient(*manager, p1)); ASSERT_TRUE(db.SelectPatientToRecycle(r, *manager)); ASSERT_EQ(p2, r); db.SetProtectedPatient(*manager, p1, false); ASSERT_FALSE(db.IsProtectedPatient(*manager, p1)); ASSERT_TRUE(db.SelectPatientToRecycle(r, *manager)); ASSERT_EQ(p2, r); db.DeleteResource(*output, *manager, p2); ASSERT_TRUE(db.SelectPatientToRecycle(r, *manager, p3)); ASSERT_EQ(p1, r); manager->Close(); }