diff Resources/Orthanc/Databases/ISqlLookupFormatter.cpp @ 152:063aa53b5917

sync
author Sebastien Jodogne <s.jodogne@gmail.com>
date Wed, 01 Jul 2020 08:54:32 +0200
parents
children e712ff3eede3
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/Resources/Orthanc/Databases/ISqlLookupFormatter.cpp	Wed Jul 01 08:54:32 2020 +0200
@@ -0,0 +1,355 @@
+/**
+ * Orthanc - A Lightweight, RESTful DICOM Store
+ * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics
+ * Department, University Hospital of Liege, Belgium
+ * Copyright (C) 2017-2020 Osimis S.A., Belgium
+ *
+ * This program is free software: you can redistribute it and/or
+ * modify it under the terms of the GNU General Public License as
+ * published by the Free Software Foundation, either version 3 of the
+ * License, or (at your option) any later version.
+ *
+ * In addition, as a special exception, the copyright holders of this
+ * program give permission to link the code of its release with the
+ * OpenSSL project's "OpenSSL" library (or with modified versions of it
+ * that use the same license as the "OpenSSL" library), and distribute
+ * the linked executables. You must obey the GNU General Public License
+ * in all respects for all of the code used other than "OpenSSL". If you
+ * modify file(s) with this exception, you may extend this exception to
+ * your version of the file(s), but you are not obligated to do so. If
+ * you do not wish to do so, delete this exception statement from your
+ * version. If you delete this exception statement from all source files
+ * in the program, then also delete it here.
+ * 
+ * This program is distributed in the hope that it will be useful, but
+ * WITHOUT ANY WARRANTY; without even the implied warranty of
+ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
+ * General Public License for more details.
+ *
+ * You should have received a copy of the GNU General Public License
+ * along with this program. If not, see <http://www.gnu.org/licenses/>.
+ **/
+
+
+#if !defined(ORTHANC_BUILDING_SERVER_LIBRARY)
+#  error Macro ORTHANC_BUILDING_SERVER_LIBRARY must be defined
+#endif
+
+#if ORTHANC_BUILDING_SERVER_LIBRARY == 1
+#  include "../PrecompiledHeadersServer.h"
+#endif
+
+#include "ISqlLookupFormatter.h"
+
+#if ORTHANC_BUILDING_SERVER_LIBRARY == 1
+#  include "../../../OrthancFramework/Sources/OrthancException.h"
+#else
+#  include <OrthancException.h>
+#endif
+
+#include "DatabaseConstraint.h"
+
+namespace Orthanc
+{
+  static std::string FormatLevel(ResourceType level)
+  {
+    switch (level)
+    {
+      case ResourceType_Patient:
+        return "patients";
+        
+      case ResourceType_Study:
+        return "studies";
+        
+      case ResourceType_Series:
+        return "series";
+        
+      case ResourceType_Instance:
+        return "instances";
+
+      default:
+        throw OrthancException(ErrorCode_InternalError);
+    }
+  }      
+  
+
+  static bool FormatComparison(std::string& target,
+                               ISqlLookupFormatter& formatter,
+                               const DatabaseConstraint& constraint,
+                               size_t index)
+  {
+    std::string tag = "t" + boost::lexical_cast<std::string>(index);
+
+    std::string comparison;
+    
+    switch (constraint.GetConstraintType())
+    {
+      case ConstraintType_Equal:
+      case ConstraintType_SmallerOrEqual:
+      case ConstraintType_GreaterOrEqual:
+      {
+        std::string op;
+        switch (constraint.GetConstraintType())
+        {
+          case ConstraintType_Equal:
+            op = "=";
+            break;
+          
+          case ConstraintType_SmallerOrEqual:
+            op = "<=";
+            break;
+          
+          case ConstraintType_GreaterOrEqual:
+            op = ">=";
+            break;
+          
+          default:
+            throw OrthancException(ErrorCode_InternalError);
+        }
+
+        std::string parameter = formatter.GenerateParameter(constraint.GetSingleValue());
+
+        if (constraint.IsCaseSensitive())
+        {
+          comparison = tag + ".value " + op + " " + parameter;
+        }
+        else
+        {
+          comparison = "lower(" + tag + ".value) " + op + " lower(" + parameter + ")";
+        }
+
+        break;
+      }
+
+      case ConstraintType_List:
+      {
+        for (size_t i = 0; i < constraint.GetValuesCount(); i++)
+        {
+          if (!comparison.empty())
+          {
+            comparison += ", ";
+          }
+            
+          std::string parameter = formatter.GenerateParameter(constraint.GetValue(i));
+
+          if (constraint.IsCaseSensitive())
+          {
+            comparison += parameter;
+          }
+          else
+          {
+            comparison += "lower(" + parameter + ")";
+          }
+        }
+
+        if (constraint.IsCaseSensitive())
+        {
+          comparison = tag + ".value IN (" + comparison + ")";
+        }
+        else
+        {
+          comparison = "lower(" +  tag + ".value) IN (" + comparison + ")";
+        }
+            
+        break;
+      }
+
+      case ConstraintType_Wildcard:
+      {
+        const std::string value = constraint.GetSingleValue();
+
+        if (value == "*")
+        {
+          if (!constraint.IsMandatory())
+          {
+            // Universal constraint on an optional tag, ignore it
+            return false;
+          }
+        }
+        else
+        {
+          std::string escaped;
+          escaped.reserve(value.size());
+
+          for (size_t i = 0; i < value.size(); i++)
+          {
+            if (value[i] == '*')
+            {
+              escaped += "%";
+            }
+            else if (value[i] == '?')
+            {
+              escaped += "_";
+            }
+            else if (value[i] == '%')
+            {
+              escaped += "\\%";
+            }
+            else if (value[i] == '_')
+            {
+              escaped += "\\_";
+            }
+            else if (value[i] == '\\')
+            {
+              escaped += "\\\\";
+            }
+            else
+            {
+              escaped += value[i];
+            }               
+          }
+
+          std::string parameter = formatter.GenerateParameter(escaped);
+
+          if (constraint.IsCaseSensitive())
+          {
+            comparison = (tag + ".value LIKE " + parameter + " " +
+                          formatter.FormatWildcardEscape());
+          }
+          else
+          {
+            comparison = ("lower(" + tag + ".value) LIKE lower(" +
+                          parameter + ") " + formatter.FormatWildcardEscape());
+          }
+        }
+          
+        break;
+      }
+
+      default:
+        return false;
+    }
+
+    if (constraint.IsMandatory())
+    {
+      target = comparison;
+    }
+    else if (comparison.empty())
+    {
+      target = tag + ".value IS NULL";
+    }
+    else
+    {
+      target = tag + ".value IS NULL OR " + comparison;
+    }
+
+    return true;
+  }
+
+
+  static void FormatJoin(std::string& target,
+                         const DatabaseConstraint& constraint,
+                         size_t index)
+  {
+    std::string tag = "t" + boost::lexical_cast<std::string>(index);
+
+    if (constraint.IsMandatory())
+    {
+      target = " INNER JOIN ";
+    }
+    else
+    {
+      target = " LEFT JOIN ";
+    }
+
+    if (constraint.IsIdentifier())
+    {
+      target += "DicomIdentifiers ";
+    }
+    else
+    {
+      target += "MainDicomTags ";
+    }
+
+    target += (tag + " ON " + tag + ".id = " + FormatLevel(constraint.GetLevel()) +
+               ".internalId AND " + tag + ".tagGroup = " +
+               boost::lexical_cast<std::string>(constraint.GetTag().GetGroup()) +
+               " AND " + tag + ".tagElement = " +
+               boost::lexical_cast<std::string>(constraint.GetTag().GetElement()));
+  }
+  
+
+  void ISqlLookupFormatter::Apply(std::string& sql,
+                                  ISqlLookupFormatter& formatter,
+                                  const std::vector<DatabaseConstraint>& lookup,
+                                  ResourceType queryLevel,
+                                  size_t limit)
+  {
+    assert(ResourceType_Patient < ResourceType_Study &&
+           ResourceType_Study < ResourceType_Series &&
+           ResourceType_Series < ResourceType_Instance);
+    
+    ResourceType upperLevel = queryLevel;
+    ResourceType lowerLevel = queryLevel;
+
+    for (size_t i = 0; i < lookup.size(); i++)
+    {
+      ResourceType level = lookup[i].GetLevel();
+
+      if (level < upperLevel)
+      {
+        upperLevel = level;
+      }
+
+      if (level > lowerLevel)
+      {
+        lowerLevel = level;
+      }
+    }
+    
+    assert(upperLevel <= queryLevel &&
+           queryLevel <= lowerLevel);
+
+    std::string joins, comparisons;
+
+    size_t count = 0;
+    
+    for (size_t i = 0; i < lookup.size(); i++)
+    {
+      std::string comparison;
+      
+      if (FormatComparison(comparison, formatter, lookup[i], count))
+      {
+        std::string join;
+        FormatJoin(join, lookup[i], count);
+        joins += join;
+
+        if (!comparison.empty())
+        {
+          comparisons += " AND " + comparison;
+        }
+        
+        count ++;
+      }
+    }
+
+    sql = ("SELECT " +
+           FormatLevel(queryLevel) + ".publicId, " +
+           FormatLevel(queryLevel) + ".internalId" +
+           " FROM Resources AS " + FormatLevel(queryLevel));
+
+    for (int level = queryLevel - 1; level >= upperLevel; level--)
+    {
+      sql += (" INNER JOIN Resources " +
+              FormatLevel(static_cast<ResourceType>(level)) + " ON " +
+              FormatLevel(static_cast<ResourceType>(level)) + ".internalId=" +
+              FormatLevel(static_cast<ResourceType>(level + 1)) + ".parentId");
+    }
+      
+    for (int level = queryLevel + 1; level <= lowerLevel; level++)
+    {
+      sql += (" INNER JOIN Resources " +
+              FormatLevel(static_cast<ResourceType>(level)) + " ON " +
+              FormatLevel(static_cast<ResourceType>(level - 1)) + ".internalId=" +
+              FormatLevel(static_cast<ResourceType>(level)) + ".parentId");
+    }
+      
+    sql += (joins + " WHERE " + FormatLevel(queryLevel) + ".resourceType = " +
+            formatter.FormatResourceType(queryLevel) + comparisons);
+
+    if (limit != 0)
+    {
+      sql += " LIMIT " + boost::lexical_cast<std::string>(limit);
+    }
+  }
+}