Mercurial > hg > orthanc-databases

annotate Framework/Plugins/StorageBackend.cpp @ 26:19eec364236b

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fix unit tests
author Sebastien Jodogne <s.jodogne@gmail.com>
date Thu, 12 Jul 2018 21:26:08 +0200
parents 9e419261f1c9
children 714c5d2bee76
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1 /**
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2 * Orthanc - A Lightweight, RESTful DICOM Store
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3 * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics
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4 * Department, University Hospital of Liege, Belgium
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5 * Copyright (C) 2017-2018 Osimis S.A., Belgium
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6 *
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7 * This program is free software: you can redistribute it and/or
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8 * modify it under the terms of the GNU Affero General Public License
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9 * as published by the Free Software Foundation, either version 3 of
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10 * the License, or (at your option) any later version.
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11 *
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12 * This program is distributed in the hope that it will be useful, but
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13 * WITHOUT ANY WARRANTY; without even the implied warranty of
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14 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
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15 * Affero General Public License for more details.
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16 *
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17 * You should have received a copy of the GNU Affero General Public License
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18 * along with this program. If not, see <http://www.gnu.org/licenses/>.
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19 **/
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20
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21
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22 #include "StorageBackend.h"
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23
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24 #if HAS_ORTHANC_EXCEPTION != 1
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25 # error HAS_ORTHANC_EXCEPTION must be set to 1
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26 #endif
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27
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28 #include "../../Framework/Common/BinaryStringValue.h"
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29 #include "../../Framework/Common/FileValue.h"
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30
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31 #include <Core/OrthancException.h>
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32
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33
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34 #define ORTHANC_PLUGINS_DATABASE_CATCH \
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35 catch (::Orthanc::OrthancException& e) \
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36 { \
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37 return static_cast<OrthancPluginErrorCode>(e.GetErrorCode()); \
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38 } \
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39 catch (::std::runtime_error& e) \
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40 { \
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41 std::string s = "Exception in storage area back-end: " + std::string(e.what()); \
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42 OrthancPluginLogError(context_, s.c_str()); \
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43 return OrthancPluginErrorCode_DatabasePlugin; \
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44 } \
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45 catch (...) \
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46 { \
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47 OrthancPluginLogError(context_, "Native exception"); \
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48 return OrthancPluginErrorCode_DatabasePlugin; \
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49 }
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50
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51
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52 namespace OrthancDatabases
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53 {
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54 void StorageBackend::ReadFromString(void*& buffer,
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55 size_t& size,
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56 const std::string& content)
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57 {
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58 size = content.size();
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59
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60 if (content.empty())
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61 {
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62 buffer = NULL;
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63 }
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64 else
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65 {
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66 buffer = malloc(size);
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67
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68 if (buffer == NULL)
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69 {
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70 throw Orthanc::OrthancException(Orthanc::ErrorCode_NotEnoughMemory);
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71 }
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72
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73 memcpy(buffer, content.c_str(), size);
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74 }
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75 }
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76
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77
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78 StorageBackend::StorageBackend(IDatabaseFactory* factory) :
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79 manager_(factory)
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80 {
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81 }
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82
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83
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84 void StorageBackend::ReadToString(std::string& content,
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85 DatabaseManager::Transaction& transaction,
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86 const std::string& uuid,
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87 OrthancPluginContentType type)
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88 {
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89 void* buffer = NULL;
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90 size_t size;
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91 Read(buffer, size, transaction, uuid, type);
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92
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93 try
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94 {
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95 content.resize(size);
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96 }
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97 catch (std::bad_alloc&)
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98 {
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99 if (size != 0)
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100 {
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101 free(buffer);
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102 }
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103
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104 throw Orthanc::OrthancException(Orthanc::ErrorCode_NotEnoughMemory);
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105 }
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106
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107 if (size != 0)
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108 {
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109 assert(buffer != NULL);
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110 memcpy(&content[0], buffer, size);
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111 }
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112
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113 free(buffer);
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114 }
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115
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116
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117 void StorageBackend::Create(DatabaseManager::Transaction& transaction,
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118 const std::string& uuid,
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119 const void* content,
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120 size_t size,
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121 OrthancPluginContentType type)
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122 {
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123 DatabaseManager::CachedStatement statement(
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124 STATEMENT_FROM_HERE, GetManager(),
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125 "INSERT INTO StorageArea VALUES (${uuid}, ${content}, ${type})");
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126
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127 statement.SetParameterType("uuid", ValueType_Utf8String);
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128 statement.SetParameterType("content", ValueType_File);
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129 statement.SetParameterType("type", ValueType_Integer64);
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130
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131 Dictionary args;
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132 args.SetUtf8Value("uuid", uuid);
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133 args.SetFileValue("content", content, size);
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134 args.SetIntegerValue("type", type);
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135
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136 statement.Execute(args);
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137 }
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138
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139
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140 void StorageBackend::Read(void*& content,
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141 size_t& size,
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142 DatabaseManager::Transaction& transaction,
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143 const std::string& uuid,
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144 OrthancPluginContentType type)
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145 {
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146 DatabaseManager::CachedStatement statement(
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147 STATEMENT_FROM_HERE, GetManager(),
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148 "SELECT content FROM StorageArea WHERE uuid=${uuid} AND type=${type}");
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parents: 14
diff changeset
149
9e419261f1c9 mysql storage area working
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diff changeset
150 statement.SetParameterType("uuid", ValueType_Utf8String);
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diff changeset
151 statement.SetParameterType("type", ValueType_Integer64);
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diff changeset
152
9e419261f1c9 mysql storage area working
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diff changeset
153 Dictionary args;
9e419261f1c9 mysql storage area working
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154 args.SetUtf8Value("uuid", uuid);
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diff changeset
155 args.SetIntegerValue("type", type);
9e419261f1c9 mysql storage area working
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diff changeset
156
9e419261f1c9 mysql storage area working
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diff changeset
157 statement.Execute(args);
9e419261f1c9 mysql storage area working
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diff changeset
158
9e419261f1c9 mysql storage area working
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diff changeset
159 if (statement.IsDone())
9e419261f1c9 mysql storage area working
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160 {
9e419261f1c9 mysql storage area working
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diff changeset
161 throw Orthanc::OrthancException(Orthanc::ErrorCode_UnknownResource);
9e419261f1c9 mysql storage area working
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162 }
9e419261f1c9 mysql storage area working
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parents: 14
diff changeset
163 else if (statement.GetResultFieldsCount() != 1)
9e419261f1c9 mysql storage area working
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parents: 14
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164 {
9e419261f1c9 mysql storage area working
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diff changeset
165 throw Orthanc::OrthancException(Orthanc::ErrorCode_Database);
9e419261f1c9 mysql storage area working
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166 }
9e419261f1c9 mysql storage area working
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parents: 14
diff changeset
167 else
9e419261f1c9 mysql storage area working
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parents: 14
diff changeset
168 {
9e419261f1c9 mysql storage area working
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diff changeset
169 const IValue& value = statement.GetResultField(0);
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170
9e419261f1c9 mysql storage area working
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diff changeset
171 switch (value.GetType())
9e419261f1c9 mysql storage area working
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172 {
9e419261f1c9 mysql storage area working
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diff changeset
173 case ValueType_File:
9e419261f1c9 mysql storage area working
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parents: 14
diff changeset
174 ReadFromString(content, size,
9e419261f1c9 mysql storage area working
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diff changeset
175 dynamic_cast<const FileValue&>(value).GetContent());
9e419261f1c9 mysql storage area working
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parents: 14
diff changeset
176 break;
9e419261f1c9 mysql storage area working
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parents: 14
diff changeset
177
9e419261f1c9 mysql storage area working
Sebastien Jodogne <s.jodogne@gmail.com>
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diff changeset
178 case ValueType_BinaryString:
9e419261f1c9 mysql storage area working
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diff changeset
179 ReadFromString(content, size,
9e419261f1c9 mysql storage area working
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diff changeset
180 dynamic_cast<const BinaryStringValue&>(value).GetContent());
9e419261f1c9 mysql storage area working
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
181 break;
9e419261f1c9 mysql storage area working
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parents: 14
diff changeset
182
9e419261f1c9 mysql storage area working
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
183 default:
9e419261f1c9 mysql storage area working
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184 throw Orthanc::OrthancException(Orthanc::ErrorCode_Database);
9e419261f1c9 mysql storage area working
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185 }
9e419261f1c9 mysql storage area working
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
186 }
9e419261f1c9 mysql storage area working
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
187 }
9e419261f1c9 mysql storage area working
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
188
9e419261f1c9 mysql storage area working
Sebastien Jodogne <s.jodogne@gmail.com>
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diff changeset
189
9e419261f1c9 mysql storage area working
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
190 void StorageBackend::Remove(DatabaseManager::Transaction& transaction,
9e419261f1c9 mysql storage area working
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
191 const std::string& uuid,
9e419261f1c9 mysql storage area working
Sebastien Jodogne <s.jodogne@gmail.com>
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diff changeset
192 OrthancPluginContentType type)
9e419261f1c9 mysql storage area working
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parents: 14
diff changeset
193 {
9e419261f1c9 mysql storage area working
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diff changeset
194 DatabaseManager::CachedStatement statement(
9e419261f1c9 mysql storage area working
Sebastien Jodogne <s.jodogne@gmail.com>
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diff changeset
195 STATEMENT_FROM_HERE, GetManager(),
9e419261f1c9 mysql storage area working
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
196 "DELETE FROM StorageArea WHERE uuid=${uuid} AND type=${type}");
9e419261f1c9 mysql storage area working
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parents: 14
diff changeset
197
9e419261f1c9 mysql storage area working
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diff changeset
198 statement.SetParameterType("uuid", ValueType_Utf8String);
9e419261f1c9 mysql storage area working
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diff changeset
199 statement.SetParameterType("type", ValueType_Integer64);
9e419261f1c9 mysql storage area working
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
200
9e419261f1c9 mysql storage area working
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
201 Dictionary args;
9e419261f1c9 mysql storage area working
Sebastien Jodogne <s.jodogne@gmail.com>
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diff changeset
202 args.SetUtf8Value("uuid", uuid);
9e419261f1c9 mysql storage area working
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
203 args.SetIntegerValue("type", type);
9e419261f1c9 mysql storage area working
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
204
9e419261f1c9 mysql storage area working
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
205 statement.Execute(args);
9e419261f1c9 mysql storage area working
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
206 }
9e419261f1c9 mysql storage area working
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
207
9e419261f1c9 mysql storage area working
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
208
9e419261f1c9 mysql storage area working
Sebastien Jodogne <s.jodogne@gmail.com>
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diff changeset
209
1
d17b2631bb67 starting StorageBackend
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210 static OrthancPluginContext* context_ = NULL;
d17b2631bb67 starting StorageBackend
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diff changeset
211 static std::auto_ptr<StorageBackend> backend_;
d17b2631bb67 starting StorageBackend
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diff changeset
212
12
41543239072d transactions for storage area
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parents: 1
diff changeset
213
1
d17b2631bb67 starting StorageBackend
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diff changeset
214 static OrthancPluginErrorCode StorageCreate(const char* uuid,
d17b2631bb67 starting StorageBackend
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
215 const void* content,
d17b2631bb67 starting StorageBackend
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parents:
diff changeset
216 int64_t size,
d17b2631bb67 starting StorageBackend
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parents:
diff changeset
217 OrthancPluginContentType type)
d17b2631bb67 starting StorageBackend
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
218 {
d17b2631bb67 starting StorageBackend
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
219 try
d17b2631bb67 starting StorageBackend
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
220 {
12
41543239072d transactions for storage area
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parents: 1
diff changeset
221 DatabaseManager::Transaction transaction(backend_->GetManager());
41543239072d transactions for storage area
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parents: 1
diff changeset
222 backend_->Create(transaction, uuid, content, static_cast<size_t>(size), type);
41543239072d transactions for storage area
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parents: 1
diff changeset
223 transaction.Commit();
1
d17b2631bb67 starting StorageBackend
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
224 return OrthancPluginErrorCode_Success;
d17b2631bb67 starting StorageBackend
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
225 }
d17b2631bb67 starting StorageBackend
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
226 ORTHANC_PLUGINS_DATABASE_CATCH;
d17b2631bb67 starting StorageBackend
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
227 }
d17b2631bb67 starting StorageBackend
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
228
d17b2631bb67 starting StorageBackend
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
229
d17b2631bb67 starting StorageBackend
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
230 static OrthancPluginErrorCode StorageRead(void** content,
d17b2631bb67 starting StorageBackend
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
231 int64_t* size,
d17b2631bb67 starting StorageBackend
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
232 const char* uuid,
d17b2631bb67 starting StorageBackend
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
233 OrthancPluginContentType type)
d17b2631bb67 starting StorageBackend
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
234 {
d17b2631bb67 starting StorageBackend
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
235 try
d17b2631bb67 starting StorageBackend
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
236 {
12
41543239072d transactions for storage area
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1
diff changeset
237 DatabaseManager::Transaction transaction(backend_->GetManager());
1
d17b2631bb67 starting StorageBackend
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
238 size_t tmp;
12
41543239072d transactions for storage area
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parents: 1
diff changeset
239 backend_->Read(*content, tmp, transaction, uuid, type);
1
d17b2631bb67 starting StorageBackend
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
240 *size = static_cast<int64_t>(tmp);
12
41543239072d transactions for storage area
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1
diff changeset
241 transaction.Commit();
1
d17b2631bb67 starting StorageBackend
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
242 return OrthancPluginErrorCode_Success;
d17b2631bb67 starting StorageBackend
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
243 }
d17b2631bb67 starting StorageBackend
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
244 ORTHANC_PLUGINS_DATABASE_CATCH;
d17b2631bb67 starting StorageBackend
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
245 }
d17b2631bb67 starting StorageBackend
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
246
d17b2631bb67 starting StorageBackend
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
247
d17b2631bb67 starting StorageBackend
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
248 static OrthancPluginErrorCode StorageRemove(const char* uuid,
d17b2631bb67 starting StorageBackend
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
249 OrthancPluginContentType type)
d17b2631bb67 starting StorageBackend
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
250 {
d17b2631bb67 starting StorageBackend
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
251 try
d17b2631bb67 starting StorageBackend
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
252 {
12
41543239072d transactions for storage area
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1
diff changeset
253 DatabaseManager::Transaction transaction(backend_->GetManager());
41543239072d transactions for storage area
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1
diff changeset
254 backend_->Remove(transaction, uuid, type);
41543239072d transactions for storage area
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1
diff changeset
255 transaction.Commit();
1
d17b2631bb67 starting StorageBackend
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
256 return OrthancPluginErrorCode_Success;
d17b2631bb67 starting StorageBackend
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
257 }
d17b2631bb67 starting StorageBackend
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
258 ORTHANC_PLUGINS_DATABASE_CATCH;
d17b2631bb67 starting StorageBackend
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
259 }
d17b2631bb67 starting StorageBackend
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
260
d17b2631bb67 starting StorageBackend
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
261
d17b2631bb67 starting StorageBackend
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
262 void StorageBackend::Register(OrthancPluginContext* context,
d17b2631bb67 starting StorageBackend
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
263 StorageBackend* backend)
d17b2631bb67 starting StorageBackend
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
264 {
d17b2631bb67 starting StorageBackend
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
265 if (context == NULL ||
d17b2631bb67 starting StorageBackend
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
266 backend == NULL)
d17b2631bb67 starting StorageBackend
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
267 {
d17b2631bb67 starting StorageBackend
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
268 throw Orthanc::OrthancException(Orthanc::ErrorCode_NullPointer);
d17b2631bb67 starting StorageBackend
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
269 }
d17b2631bb67 starting StorageBackend
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
270
d17b2631bb67 starting StorageBackend
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
271 if (context_ != NULL ||
d17b2631bb67 starting StorageBackend
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
272 backend_.get() != NULL)
d17b2631bb67 starting StorageBackend
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
273 {
d17b2631bb67 starting StorageBackend
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
274 // This function can only be invoked once in the plugin
d17b2631bb67 starting StorageBackend
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
275 throw Orthanc::OrthancException(Orthanc::ErrorCode_BadSequenceOfCalls);
d17b2631bb67 starting StorageBackend
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
276 }
d17b2631bb67 starting StorageBackend
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
277 else
d17b2631bb67 starting StorageBackend
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
278 {
d17b2631bb67 starting StorageBackend
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
279 context_ = context;
d17b2631bb67 starting StorageBackend
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
280 backend_.reset(backend);
16
9e419261f1c9 mysql storage area working
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 14
diff changeset
281 backend_->GetManager().Open();
1
d17b2631bb67 starting StorageBackend
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parents:
diff changeset
282
d17b2631bb67 starting StorageBackend
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
283 OrthancPluginRegisterStorageArea(context_, StorageCreate, StorageRead, StorageRemove);
d17b2631bb67 starting StorageBackend
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
284 }
d17b2631bb67 starting StorageBackend
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
285 }
d17b2631bb67 starting StorageBackend
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
286
d17b2631bb67 starting StorageBackend
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
287
d17b2631bb67 starting StorageBackend
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
288 void StorageBackend::Finalize()
d17b2631bb67 starting StorageBackend
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
289 {
d17b2631bb67 starting StorageBackend
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
290 backend_.reset(NULL);
d17b2631bb67 starting StorageBackend
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
291 context_ = NULL;
d17b2631bb67 starting StorageBackend
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
292 }
d17b2631bb67 starting StorageBackend
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
293 }