Mercurial > hg > orthanc-book
changeset 82:0752d8518623
cont
author | Sebastien Jodogne <s.jodogne@gmail.com> |
---|---|
date | Thu, 15 Dec 2016 21:45:44 +0100 |
parents | 4eea0dc5f071 |
children | 468cb58b702a |
files | Sphinx/source/plugins/wsi.rst |
diffstat | 1 files changed, 16 insertions(+), 6 deletions(-) [+] |
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--- a/Sphinx/source/plugins/wsi.rst Thu Dec 15 18:20:59 2016 +0100 +++ b/Sphinx/source/plugins/wsi.rst Thu Dec 15 21:45:44 2016 +0100 @@ -15,7 +15,7 @@ 2. A plugin that extends Orthanc with a Web viewer of whole-slide images for digital pathology. 3. Another command-line tool that converts a DICOM series stored - in Orthanc, to a standard hierarchical TIFF image. + inside Orthanc, to a standard hierarchical TIFF image. For general information, check out the `official homepage of the framework <http://www.orthanc-server.com/static.php?page=wsi>`__. @@ -45,7 +45,7 @@ * ``Applications/Build/OrthancWSIDicomizer``, which contains the DICOM-izer. * ``Applications/Build/OrthancWSIDicomToTiff``, which contains the DICOM-to-TIFF converter. -* ``ViewerPlugin/Build/OrthancWSI``, which is a shared library containing the plugin for Orthanc. +* ``ViewerPlugin/Build/OrthancWSI``, which is a shared library containing the viewer plugin for Orthanc. Note that pre-compiled binaries for Microsoft Windows `are available <http://www.orthanc-server.com/browse.php?path=/whole-slide-imaging>`__. @@ -76,10 +76,10 @@ Once a :ref:`DICOM series <model-world>` is opened using Orthanc Explorer, a yellow button entitled ``Whole-Slide Imaging Viewer`` will -show up for whole-slide images. It will open the WSI viewer for that -particular series. This behavior can be seen on the Orthanc Explorer -running on our `WSI demonstration server -<http://wsi.orthanc-server.com/orthanc/app/explorer.html>`__. +show up for series corresponding to whole-slide images. This button +will open the WSI viewer for that particular series. This behavior can +be seen on the Orthanc Explorer running on our `WSI demonstration +server <http://wsi.orthanc-server.com/orthanc/app/explorer.html>`__. @@ -114,6 +114,16 @@ takes place: If the source TIFF image contains JPEG tiles, these tiles will be written as such. +Obviously, you can specify the parameters of your Orthanc server:: + + $ OrthancWSIDicomizer Source.tif --orthanc=http://localhost:8042/ --username=orthanc --password=orthanc + +It is also possible to write the DICOM instance directly onto some +folder of the filesystem (the target folder must be existing):: + + $ OrthancWSIDicomizer Source.tif --folder=/tmp/dicomized/ + + Re-encoding a DICOM image ^^^^^^^^^^^^^^^^^^^^^^^^^