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python: overriding core API
author | Alain Mazy <am@osimis.io> |
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date | Tue, 09 Jan 2024 11:50:17 +0100 |
parents | 0a73844cc5bc |
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.. _dcmtk-tricks: Some tricks with DCMTK ====================== .. contents:: :depth: 3 Sending uncommon or recent SOP class UIDs ----------------------------------------- On many systems, the ``storescu`` command from the `DCMTK project <https://support.dcmtk.org/docs/storescu.html>`__ is not configured out-of-the-box to send uncommon/recent SOP class UIDs or transfer syntaxes. You might have to fine-tune the default configuration file of ``storescu`` in order to be able to send e.g. MPEG4 videos or breast tomosynthesis images. .. highlight:: text For instance, here is the result of sending one MPEG4 video on a Ubuntu 18.04 box:: $ storescu localhost 4242 XC000000.dcm E: No presentation context for: (VVp) 1.2.840.10008.5.1.4.1.1.77.1.4.1 E: Store SCU Failed: 0006:0208 DIMSE No valid Presentation Context ID This error message is unrelated to Orthanc (especially if you have set the :ref:`configuration option <configuration>` ``UnknownSopClassAccepted`` to ``true``). To properly adapt the configuration file, first determine the value of the DICOM tag ``SOPClassUID`` (0008,0016) and the transfer syntax of the file, which can be done by using the ``dcm2xml`` command-line tool:: $ dcm2xml XC000000.dcm | grep -E 'data-set xfer|"SOPClassUID"' <data-set xfer="1.2.840.10008.1.2.4.102" name="MPEG-4 AVC/H.264 High Profile / Level 4.1"> <element tag="0008,0016" vr="UI" vm="1" len="32" name="SOPClassUID">1.2.840.10008.5.1.4.1.1.77.1.4.1</element> Secondly, create a copy of the default ``storescu.cfg`` configuration file, e.g. on Ubuntu 18.04:: $ cp /etc/dcmtk/storescu.cfg /tmp/storescu.cfg Edit this file so as to replace one of the 128 preconfigured presentation contexts, using this information:: $ diff /etc/dcmtk/storescu.cfg storescu.cfg 198c198 < PresentationContext128 = VideoPhotographicImageStorage\MPEG2 --- > PresentationContext128 = 1.2.840.10008.5.1.4.1.1.77.1.4.1\MPEG4 Obviously, you can replace more predefinitions if other pairs of SOP class UID and transfer syntax are needed. Finally, run ``storescu`` using this new configuration:: $ storescu -xf /tmp/storescu.cfg Default localhost 4242 XC000000.dcm Note that the ``storescu`` command from the `dcm4che project <https://www.dcm4che.org/>`__ might be more easy to use in such situations.