Mercurial > hg > orthanc-book
diff Sphinx/source/plugins/python/pil-conversions.py @ 706:c62539d00251
Conversions between Orthanc and Python images
author | Sebastien Jodogne <s.jodogne@gmail.com> |
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date | Fri, 11 Jun 2021 12:42:39 +0200 |
parents | |
children | 8a247c645ac6 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Sphinx/source/plugins/python/pil-conversions.py Fri Jun 11 12:42:39 2021 +0200 @@ -0,0 +1,52 @@ +import json +import PIL.Image +import PIL.ImageDraw +import orthanc + +URL = 'http://hg.orthanc-server.com/orthanc-tests/raw-file/Orthanc-1.9.3/Database/LenaTwiceWithFragments.dcm' +USERNAME = '' +PASSWORD = '' + +def OnChange(changeType, level, resource): + if changeType == orthanc.ChangeType.ORTHANC_STARTED: + + # (1) Download a sample DICOM instance and decode it + orthanc.LogWarning('Downloading: %s' % URL) + lena = orthanc.HttpGet(URL, USERNAME, PASSWORD) + + dicom = orthanc.CreateDicomInstance(lena) + orthanc.LogWarning('Number of frames: %d' % dicom.GetInstanceFramesCount()) + + # (2) Access the first frame of the instance as a PIL image + frame = dicom.GetInstanceDecodedFrame(0) + size = (frame.GetImageWidth(), frame.GetImageHeight()) + + if frame.GetImagePixelFormat() == orthanc.PixelFormat.RGB24: + mode = 'RGB' + else: + raise Exception('Unsupported pixel format') + + image = PIL.Image.frombuffer(mode, size, frame.GetImageBuffer(), 'raw', mode, 0, 1) + + # (3) Draw a red cross over the PIL image + draw = PIL.ImageDraw.Draw(image) + draw.line((0, 0) + image.size, fill=(255,0,0), width=10) + draw.line((0, image.size[1], image.size[0], 0), fill=(255,0,0), width=10) + + # (4) Convert back the modified PIL image to an Orthanc image + buf = image.tobytes() + a = orthanc.CreateImageFromBuffer(frame.GetImagePixelFormat(), image.size[0], image.size[1], + len(buf) / image.size[1], buf) + + # (5) Create and upload a new DICOM instance with the modified frame + tags = { + 'SOPClassUID' : '1.2.840.10008.5.1.4.1.1.1', + 'PatientID' : 'HELLO', + 'PatientName' : 'WORLD', + } + + s = orthanc.CreateDicom(json.dumps(tags), a, orthanc.CreateDicomFlags.GENERATE_IDENTIFIERS) + orthanc.RestApiPost('/instances', s) + orthanc.LogWarning('Image successfully modified and uploaded!') + +orthanc.RegisterOnChangeCallback(OnChange)