annotate Sphinx/source/plugins/osimis-webviewer.rst @ 349:60080d792f25

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author Sebastien Jodogne <s.jodogne@gmail.com>
date Fri, 27 Mar 2020 18:21:55 +0100
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1 .. _osimis_webviewer:
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4 Osimis Web Viewer plugin
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5 ========================
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6
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7 .. contents::
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8
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9 This plugin by Osimis extends Orthanc with a Web viewer of medical
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10 images, with more advanced features than the basic :ref:`Orthanc Web
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11 viewer plugin <webviewer>`. The Osimis plugin adds tools for
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12 measuring, for viewing multiple series, and for split-pane.
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13
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14 For general information, check out the `official homepage of the
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15 plugin
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16 <http://www.orthanc-server.com/static.php?page=osimis-web-viewer>`__.
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17 Also `check out the source code
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18 <https://bitbucket.org/osimis/osimis-webviewer-plugin>`__.
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21 How to get it
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22 -------------
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23
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24 The Osimis Web viewer is part of the `Windows installers
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25 <https://www.orthanc-server.com/download-windows.php>`__.
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26
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27 For Linux users, you'll find it in the `osimis/orthanc
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28 <https://osimis.atlassian.net/wiki/spaces/OKB/pages/26738689/How+to+use+osimis+orthanc+Docker+images>`__
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29 Docker images or you can download the LSB (Linux Standard Base)
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30 binaries `here
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31 <http://orthanc.osimis.io/lsb/plugin-osimis-webviewer/releases/1.3.1/libOsimisWebViewer.so>`__.
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32
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33 The compilation process is quite complex since it requires to build
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34 first the frontend and then the backend. All information can be found
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35 in the `source code
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36 <https://bitbucket.org/osimis/osimis-webviewer-plugin>`__.
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39 Usage
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40 -----
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41
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42 .. highlight:: json
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43
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44 On Windows, the plugin is enabled by default and will work
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45 out-of-the-box.
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46
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47 If you're using the ``osimis/orthanc`` Docker image, you'll have to
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48 define the WVB_ENABLED `environment variable
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49 <https://osimis.atlassian.net/wiki/spaces/OKB/pages/26738689/How+to+use+osimis+orthanc+Docker+images#Howtouseosimis/orthancDockerimages?-OsimisWebViewer>`__
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50 to ``true``.
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51
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52 On plain GNU/Linux distributions (i.e. if not using Docker), the
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53 Osimis Web viewer will only work with LSB (Linux Standard Base)
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54 Orthanc binaries that can be downloaded from `here
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55 <https://lsb.orthanc-server.com/orthanc/>`__ (that will work with most
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56 recent GNU/Linux distributions). Once Orthanc is installed, you must
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57 change the :ref:`configuration file <configuration>` to tell Orthanc
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58 where it can find the plugin: This is done by properly modifying the
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59 ``Plugins`` option. You could for instance use the following
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60 configuration file::
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61
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62 {
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63 "Name" : "MyOrthanc",
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64 [...]
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65 "Plugins" : [
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66 "/home/user/xxx/Downloads/libOsimisWebViewer.so"
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67 ]
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68 }
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70 .. highlight:: text
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71
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72 Orthanc must of course be restarted after the modification of its
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73 configuration file.
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74
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75 Once a :ref:`DICOM study <model-world>` is opened using Orthanc
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76 Explorer, a yellow button entitled ``Osimis Web Viewer`` will show
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77 up. It will open the Web viewer for that particular study. See also
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78 the interactive demonstration on the `official homepage of the plugin
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79 <https://www.orthanc-server.com/static.php?page=osimis-web-viewer>`__.
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80
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81 Advanced options
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82 ----------------
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83
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84 .. highlight:: json
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85
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86 The configuration of the Web viewer can be fine-tuned by adapting some
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87 options in the `configuration file
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88 <https://bitbucket.org/osimis/osimis-webviewer-plugin/src/master/doc/default-configuration.json>`__.
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89
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90 FAQ
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91 ---
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92
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93 - **Can I use the Osimis Viewer in a medical environment ?**
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95 The Osimis Viewer is not a Medical Device; it is not CE marked or FDA approved.
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96
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97 The Osimis Viewer is an open source Viewer that cannot be used for diagnostic or therapeutic purposes.
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99 However, the viewer can be used as a communication tool that allows Researchers, Teachers, Technicians, General Practitioner or Patients to visualize medical images for information only.
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100
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101 Check your local regulations to ensure you’re using it in a legal manner.
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104 - **What video formats are supported by the Osimis Web Viewer ?**
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105
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106 The set of codecs supported by the Osimis Viewer is an intersection
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107 of the sets of codecs supported by the `DICOM standard
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108 <http://dicom.nema.org/medical/dicom/current/output/chtml/part05/PS3.5.html>`__
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109 and those supported by the `web browsers
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110 <https://developer.mozilla.org/en-US/docs/Web/HTML/Supported_media_formats>`__.
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111 In short, this mostly comes down to just MPEG-4.
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112
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113 - **Where are the annotations stored ?**
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114
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115 Annotations are stored in :ref:`metadata <metadata>` (id ``9999``)
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116 in a custom format. Note that annotation storage is disabled by
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117 default and can be enabled by setting ``"AnnotationStorageEnabled":
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118 true`` in the configuration file.
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119